RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ACBD7Q8N6N7 88 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 OR52I1Q8NGK6 324 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 FAM168AQ92567 244 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 SPSB4Q96A44 273 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 ELMOD3Q96FG2 381 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 SIGLEC11Q96RL6 698 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 RHNO1Q9BSD3 238 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 SOX7Q9BT81 388 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 PBOV1Q9GZY1 135 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 TREM2Q9NZC2 230 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 ZDHHC8Q9ULC8 765 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 R4GMQ9 66 aa12.19□□□□□ -0.46
USP3-205ENST00000557884 IGHV3-64DA0A0J9YX35 117 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 hCG_38984A0A1B0GV85 526 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 H0YJX3 145 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 H0YL77 283 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
USP3-205ENST00000557884 RRP9O43818 475 aaKnown RBP12.18□□□□□ -0.46
USP3-205ENST00000557884 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
USP3-205ENST00000557884 HLA-DPB1P04440 258 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 CSF3P09919 207 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 TNFSF4P23510 183 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 DCTDP32321 178 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 PSMB10P40306 273 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 GSK3AP49840 483 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 DSCR9P59020 149 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 TNFAIP6P98066 277 aaPredicted RBP12.18□□□□□ -0.46
USP3-205ENST00000557884 RAB40BQ12829 278 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 FAM209AQ5JX71 171 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 ZNF684Q5T5D7 378 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 BCL2L15Q5TBC7 163 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 LIPNQ5VXI9 398 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 FAM220AQ7Z4H9 259 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 THAP5Q7Z6K1 395 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 LHFPL3Q86UP9 236 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 COMMD2Q86X83 199 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 CIARTQ8N365 385 aaPredicted RBP12.18□□□□□ -0.46
USP3-205ENST00000557884 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 OR13G1Q8NGZ3 307 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 C10orf105Q8TEF2 133 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 RDH5Q92781 318 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
USP3-205ENST00000557884 YIPF5Q969M3 257 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 LYZL4Q96KX0 146 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 SLC30A2Q9BRI3 323 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 EGLN1Q9GZT9 426 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 OPA3Q9H6K4 179 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 ACOXLQ9NUZ1 547 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 TMEM100Q9NV29 134 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 NKIRAS2Q9NYR9 191 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 OR52A1Q9UKL2 312 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 PCDHGB1Q9Y5G3 927 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 CACNG2Q9Y698 323 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 HSPE1-MOB4S4R3N1 261 aa12.18□□□□□ -0.46
USP3-205ENST00000557884 ACOD1A6NK06 481 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 J3QLW9 94 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 MLNRO43193 412 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 SRSF10O75494 262 aaKnown RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 ZNF19P17023 458 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 CA6P23280 308 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 CFL1P23528 166 aaKnown RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 RBMXP38159 391 aaKnown RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 MMP16P51512 607 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 OR12D2P58182 307 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 KLHL22Q53GT1 634 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 LAIR2Q6ISS4 152 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 ZNF786Q8N393 782 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 OR51E1Q8TCB6 317 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 ITLN1Q8WWA0 313 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 RORBQ92753 470 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 FAM71F1Q96KD3 344 aaPredicted RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 OR2V2Q96R30 315 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 DIRC2Q96SL1 478 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 ALG8Q9BVK2 526 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 RGCCQ9H4X1 137 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 MYOZ1Q9NP98 299 aaPredicted RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 G6PC2Q9NQR9 355 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 GPR84Q9NQS5 396 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 NUFIP1Q9UHK0 495 aaKnown RBP12.17□□□□□ -0.46
USP3-205ENST00000557884 SLC22A13Q9Y226 551 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 SNX5Q9Y5X3 404 aa12.17□□□□□ -0.46
USP3-205ENST00000557884 IGHV1-69-2A0A0G2JMI3 117 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 LOC390937A0A1W2PQ73 354 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 F5H5P2 479 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 XPNPEP2O43895 674 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 FAM20BO75063 409 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 SULT1C4O75897 302 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 IGHA1P01876 353 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 CD55P08174 381 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 ADH4P08319 380 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 CD99P14209 185 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 ACKR3P25106 362 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 VHLP40337 213 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 OR8G1Q15617 311 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 ODF4Q2M2E3 257 aa12.16□□□□□ -0.46
USP3-205ENST00000557884 CDONQ4KMG0 1287 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms