RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TRIP10Q15642 601 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 SNCBQ16143 134 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 ZIK1Q3SY52 487 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-211ENST00000557623 C6orf52Q5T4I8 152 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 LRRN1Q6UXK5 716 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 FAM57BQ71RH2 274 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 PRSS45Q7RTY3 260 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 BCDIN3DQ7Z5W3 292 aaKnown RBP10.58□□□□□ -0.72
SLIRP-211ENST00000557623 OR2AE1Q8NHA4 323 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 ITLN1Q8WWA0 313 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 REEP6Q96HR9 211 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 PGAM5Q96HS1 289 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 OR2V2Q96R30 315 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 ADGRL4Q9HBW9 690 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 MRPL15Q9P015 296 aaKnown RBP10.58□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF391Q9UJN7 358 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 KLHDC2Q9Y2U9 406 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 LRP12Q9Y561 859 aa10.58□□□□□ -0.72
SLIRP-211ENST00000557623 ACOD1A6NK06 481 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 A8MV72 311 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF670-ZNF695F2Z2N8 137 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 GMDSO60547 372 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 SBK2P0C263 348 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 RIDAP52758 137 aaKnown RBP10.57□□□□□ -0.72
SLIRP-211ENST00000557623 HCCSP53701 268 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 ROM1Q03395 351 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 MZT1Q08AG7 82 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 MEDAGQ5VYS4 303 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 FAM166AQ6J272 317 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 KLBQ86Z14 1044 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 SLC35F2Q8IXU6 374 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF679Q8IYX0 411 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 CELF2-AS1Q8N7Q2 184 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 OR10AD1Q8NGE0 317 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 CLDND2Q8NHS1 167 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 SGK3Q96BR1 496 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 MEGF10Q96KG7 1140 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 OR8B4Q96RC9 309 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 BRD7Q9NPI1 651 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 C8orf4Q9NR00 106 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 TMEM106BQ9NUM4 274 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 CLN6Q9NWW5 311 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 TREM2Q9NZC2 230 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.57□□□□□ -0.72
SLIRP-211ENST00000557623 PPP1R3CQ9UQK1 317 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 WIPI2Q9Y4P8 454 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 CACNG2Q9Y698 323 aa10.57□□□□□ -0.72
SLIRP-211ENST00000557623 C5orf63A6NC05 138 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 SNTNA6NMZ2 147 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 ANKRD30BLA7E2S9 258 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 E9PQ18 207 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 H0YL77 283 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 MLNRO43193 412 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF16P17020 682 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-211ENST00000557623 ATP6V1E1P36543 226 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 CXCR4P61073 352 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 FAM3AP98173 230 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 MVKQ03426 396 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 EGR3Q06889 387 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 OR8G1Q15617 311 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 ZNF829Q3KNS6 432 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-211ENST00000557623 SPRNQ5BIV9 151 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 SLC25A30Q5SVS4 291 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 AVPI1Q5T686 147 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 FTMTQ8N4E7 242 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 LINC01356Q8N9X3 169 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 SPERTQ8NA61 448 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 OR56B2PQ8NGI1 322 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 OR51G2Q8NGK0 314 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 ITFG2Q969R8 447 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 ERGIC1Q969X5 290 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 MSI2Q96DH6 328 aaKnown RBP10.56□□□□□ -0.72
SLIRP-211ENST00000557623 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 RDH12Q96NR8 316 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 SLC29A1Q99808 456 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 NARFLQ9H6Q4 476 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 KCNS2Q9ULS6 477 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 COPS3Q9UNS2 423 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 GMPPBQ9Y5P6 360 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 NPTNQ9Y639 398 aa10.56□□□□□ -0.72
SLIRP-211ENST00000557623 MALRD1Q5VYJ5 2156 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-211ENST00000557623 LOC100289279A0A1B0GTE1 492 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 TMEM269A0A1B0GVZ9 245 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 B4DSR2 109 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 F5H5P2 479 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 PSMD9O00233 223 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 MPZL2O60487 215 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 HLA-DPB1P04440 258 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ANPEPP15144 967 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 CA6P23280 308 aa10.55□□□□□ -0.72
SLIRP-211ENST00000557623 ANOS1P23352 680 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms