RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 RSPH14Q9UHP6 348 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 KLHL21Q9UJP4 597 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 SLC17A4Q9Y2C5 497 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 HES2Q9Y543 173 aa3.72□□□□□ -1.81
MTHFD1-216ENST00000557539 GTF3C1Q12789 2109 aa3.71□□□□□ -1.81
MTHFD1-216ENST00000557539 TMEM120BA0PK00 339 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ARGFXA6NJG6 315 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 C3orf84H3BNL1 204 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 I3L4J1 428 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PSMD11O00231 422 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 CDC7O00311 574 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 EEDO75530 441 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 CCDC166P0CW27 439 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 RBMY1A1P0DJD3 496 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PRB4P10163 310 aaPredicted RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 HOXB6P17509 224 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 F8A1P23610 371 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 CXCR2P25025 360 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 RORAP35398 523 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 TFPI2P48307 235 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 RPL34P49207 117 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 KLK7P49862 253 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PSMD4P55036 377 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 UBE2MP61081 183 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ACTA2P62736 377 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ACTG2P63267 376 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ACTC1P68032 377 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ACTA1P68133 377 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 CCL7P80098 99 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 CXCL6P80162 114 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PDIA2Q13087 525 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 IHHQ14623 411 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 LRRC36Q1X8D7 754 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PAN3Q58A45 887 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 STUMQ69YW2 141 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 WDR74Q6RFH5 385 aaPredicted RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 GPRIN3Q6ZVF9 776 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 HDDC2Q7Z4H3 204 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 LHFPL3Q86UP9 236 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PPP1R27Q86WC6 154 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ITPRIPQ8IWB1 547 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PDIK1LQ8N165 341 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 TCAIMQ8N3R3 496 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF557Q8N988 423 aaPredicted RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 FDCSPQ8NFU4 85 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 LILRB4Q8NHJ6 448 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PIH1D2Q8WWB5 315 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 OR1E3Q8WZA6 343 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 NAT6Q93015 286 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 FGGYQ96C11 551 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ITCHQ96J02 903 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 RARRES2Q99969 163 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 PELOQ9BRX2 385 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ING2Q9H160 280 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 GAL3ST2Q9H3Q3 398 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 HRASLS2Q9NWW9 162 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 DEC1Q9P2X7 70 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF580Q9UK33 172 aa3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 TDRD15B5MCY1 1934 aaKnown RBP3.71□□□□□ -1.82
MTHFD1-216ENST00000557539 IGHV1OR15-1A0A075B7D0 117 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 FAM231BA6NCW3 169 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 PRR23D1E9PI22 279 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 TBL1XO60907 577 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 TBX6O95947 436 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 HLA-HP01893 362 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 SERPINA5P05154 406 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 ACSM4P0C7M7 580 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 PRR23D2P0DMB1 279 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 TCN1P20061 433 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 SLC26A2P50443 739 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 SLC25A1P53007 311 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 CLDN18P56856 261 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 SELENOTP62341 195 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 ECH1Q13011 328 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 OR2B11Q5JQS5 317 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 C6orf183Q5T699 404 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 GPR107Q5VW38 600 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 OLFML2AQ68BL7 652 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 H3F3CQ6NXT2 135 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 MBOAT1Q6ZNC8 495 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 MRPL21Q7Z2W9 205 aaKnown RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 CMC1Q7Z7K0 106 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 FAM58AQ8N1B3 248 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 INO80EQ8NBZ0 244 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 OR51L1Q8NGJ5 315 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 AGAP11Q8TF27 550 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 MYDGFQ969H8 173 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 SLC25A38Q96DW6 304 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 OPALINQ96PE5 141 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 OR5B12Q96R08 314 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 KCTD14Q9BQ13 255 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 HES7Q9BYE0 225 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 SELENOIQ9C0D9 397 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 PIGUQ9H490 435 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 MRPL47Q9HD33 250 aaKnown RBP3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 ZC4H2Q9NQZ6 224 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 FLVCR1Q9Y5Y0 555 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 KPTNQ9Y664 436 aa3.7□□□□□ -1.82
MTHFD1-216ENST00000557539 NCOA6Q14686 2063 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms