RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RMND5AQ9H871 391 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM27Q9HBJ8 222 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 CCNB1IP1Q9NPC3 277 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 EIF3KQ9UBQ5 218 aaKnown RBP4.88□□□□□ -1.63
VPS33B-207ENST00000557470 KLHL21Q9UJP4 597 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
VPS33B-207ENST00000557470 IGKV1D-43A0A0B4J1Z2 117 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 LINC00854A0A1B0GVQ3 168 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 TMEM178BH3BS89 294 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 H3BSA7 217 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 CLIC1O00299 241 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 KPNA4O00629 521 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 CHP2O43745 196 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 TIMM8AO60220 97 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SLC2A10O95528 541 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 MELTFP08582 738 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 WNT2P09544 360 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 ASAH2BP0C7U1 165 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 TNFRSF1AP19438 455 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 AQP1P29972 269 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 PCP4P48539 62 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 GDI2P50395 445 aaKnown RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 GBX2P52951 348 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SNU13P55769 128 aaKnown RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 ERVK-25P63136 954 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 MRPS34P82930 218 aaKnown RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 PSG4Q00888 419 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 FMODQ06828 376 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 PSG7Q13046 419 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 HLXQ14774 488 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 NPTX1Q15818 432 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 TAF9Q16594 264 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 RUNDC3AQ59EK9 446 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 C10orf128Q5T292 105 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 GCNT6Q5T4J0 391 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 LCE4AQ5TA78 99 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 REEP3Q6NUK4 255 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF613Q6PF04 617 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 UNQ6126/PRO20091Q6UXV3 157 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 Q6YL49 198 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 Q6ZPA2 131 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 Q6ZR03 302 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 ZNF554Q86TJ5 538 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 RANBP3LQ86VV4 465 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 KLBQ86Z14 1044 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 MSRB3Q8IXL7 192 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 KIRREL3Q8IZU9 778 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 MUC20Q8N307 709 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 OR2Z1Q8NG97 314 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 OR56B2PQ8NGI1 322 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 LINC01006Q8NI28 216 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 ITLN1Q8WWA0 313 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 RAB40AQ8WXH6 277 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 GTF2H4Q92759 462 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 NABP1Q96AH0 204 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SAMD8Q96LT4 415 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 HIST1H2AAQ96QV6 131 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SRSF8Q9BRL6 282 aaKnown RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 CCDC28BQ9BUN5 200 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SLC19A3Q9BZV2 496 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 YIPF3Q9GZM5 350 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 WNT5BQ9H1J7 359 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 RAD21L1Q9H4I0 556 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 NANOGQ9H9S0 305 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SIAEQ9HAT2 523 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SLCO1B3Q9NPD5 702 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 NANSQ9NR45 359 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SDR39U1Q9NRG7 319 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-207ENST00000557470 SLC25A37Q9NYZ2 338 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 ATPIF1Q9UII2 106 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 PPP1R3CQ9UQK1 317 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 UGT2A1Q9Y4X1 527 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 RYR3Q15413 4870 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 TENM3Q9P273 2699 aa4.87□□□□□ -1.63
VPS33B-207ENST00000557470 KIR2DS1A0A191URI9 304 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 A0A1W2PRG6 482 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 SMIM30A4D0T7 59 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 PRORSD1PA6NEY8 169 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 OOEPA6NGQ2 149 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 TRPC5OSA6NMA1 111 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 CPSF4LA6NMK7 179 aaKnown RBP4.86□□□□□ -1.63
VPS33B-207ENST00000557470 ANXA2P2A6NMY6 339 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 MCIDASD6RGH6 385 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 G3V4G9 280 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 BLOC1S5-TXNDC5H3BN57 136 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 M0QX08 132 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 HDAC3O15379 428 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 PIN1P1O15428 100 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 MAGEB3O15480 346 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 PAGE4O60829 102 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 TRMUO75648 421 aaKnown RBP4.86□□□□□ -1.63
VPS33B-207ENST00000557470 CLPXO76031 633 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 LYPD3O95274 346 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 THY1P04216 161 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 S100A6P06703 90 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 UMPSP11172 480 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 GYPEP15421 78 aa4.86□□□□□ -1.63
VPS33B-207ENST00000557470 CAMPP49913 170 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms