RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TREM2Q9NZC2 230 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.57□□□□□ -0.72
SLIRP-209ENST00000557342 PPP1R3CQ9UQK1 317 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 WIPI2Q9Y4P8 454 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 CACNG2Q9Y698 323 aa10.57□□□□□ -0.72
SLIRP-209ENST00000557342 C5orf63A6NC05 138 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 SNTNA6NMZ2 147 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ANKRD30BLA7E2S9 258 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 E9PQ18 207 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 H0YL77 283 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 MLNRO43193 412 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ATP6V1G2O95670 118 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF16P17020 682 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ATP6V1E1P36543 226 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 PRSS12P56730 875 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 CXCR4P61073 352 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 FAM3AP98173 230 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 MVKQ03426 396 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 EGR3Q06889 387 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 OR8G1Q15617 311 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF829Q3KNS6 432 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-209ENST00000557342 SPRNQ5BIV9 151 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 SLC25A30Q5SVS4 291 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 AVPI1Q5T686 147 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 FTMTQ8N4E7 242 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 LINC01356Q8N9X3 169 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 SPERTQ8NA61 448 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 OR56B2PQ8NGI1 322 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 OR51G2Q8NGK0 314 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ITFG2Q969R8 447 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 ERGIC1Q969X5 290 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 RAB39BQ96DA2 213 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 MSI2Q96DH6 328 aaKnown RBP10.56□□□□□ -0.72
SLIRP-209ENST00000557342 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 RDH12Q96NR8 316 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 SLC29A1Q99808 456 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 RASSF4Q9H2L5 321 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 NARFLQ9H6Q4 476 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 RNPEPL1Q9HAU8 725 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 IKZF2Q9UKS7 526 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 KCNS2Q9ULS6 477 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 COPS3Q9UNS2 423 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 GMPPBQ9Y5P6 360 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 NPTNQ9Y639 398 aa10.56□□□□□ -0.72
SLIRP-209ENST00000557342 MALRD1Q5VYJ5 2156 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-209ENST00000557342 LOC100289279A0A1B0GTE1 492 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 TMEM269A0A1B0GVZ9 245 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 LRRC30A6NM36 301 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 B4DSR2 109 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 F5H5P2 479 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 PSMD9O00233 223 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 MPZL2O60487 215 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 HLA-DPB1P04440 258 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ANPEPP15144 967 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 CA6P23280 308 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ANOS1P23352 680 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 IL2RGP31785 369 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 CD200P41217 278 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 SNRPGP62308 76 aaKnown RBP10.55□□□□□ -0.72
SLIRP-209ENST00000557342 RCN1Q15293 331 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 OCLNQ16625 522 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 GFOD2Q3B7J2 385 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF322Q6U7Q0 402 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-209ENST00000557342 C1orf87Q8N0U7 546 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF555Q8NEP9 628 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 CSNK2A3Q8NEV1 391 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 OR2T27Q8NH04 317 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 MBOAT4Q96T53 435 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ADAT1Q9BUB4 502 aaKnown RBP10.55□□□□□ -0.72
SLIRP-209ENST00000557342 TMEM160Q9NX00 188 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF319Q9P2F9 582 aa10.55□□□□□ -0.72
SLIRP-209ENST00000557342 A0A0U1RQV5 110 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 ISPDA4D126 451 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 LMX1BO60663 402 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 TGFAP01135 160 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 IRF2P14316 349 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 GATA4P43694 442 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 MTNR1AP48039 350 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 GSK3AP49840 483 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 MMP16P51512 607 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 CDH15P55291 814 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 SPICQ8N5J4 248 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 PLPP7Q8NBV4 271 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 OR8B12Q8NGG6 310 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 OR11L1Q8NGX0 322 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 GAL3ST1Q99999 423 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 MOB1AQ9H8S9 216 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 ABCB9Q9NP78 766 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 C14orf119Q9NWQ9 140 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 FAM118AQ9NWS6 357 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 FAM206AQ9NX38 181 aa10.54□□□□□ -0.72
SLIRP-209ENST00000557342 SMPD3Q9NY59 655 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-209ENST00000557342 HIVEP2P31629 2446 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms