RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MDFIC2A0A1B0GVS7 189 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 C22orf46C9J442 243 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 J3KTA2 159 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 ARPC3O15145 178 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 FAM20BO75063 409 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 TOX4O94842 621 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 PPP1R3DO95685 299 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 ACSM4P0C7M7 580 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 TROVE2P10155 538 aaKnown RBP eCLIP7.17□□□□□ -1.26
VRK1-206ENST00000557222 RBMXP38159 391 aaKnown RBP7.17□□□□□ -1.26
VRK1-206ENST00000557222 MDH1P40925 334 aaKnown RBP7.17□□□□□ -1.26
VRK1-206ENST00000557222 CDKN2AP42771 156 aaKnown RBP7.17□□□□□ -1.26
VRK1-206ENST00000557222 GPR4P46093 362 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 MZT1Q08AG7 82 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 GK2Q14410 553 aaPredicted RBP7.17□□□□□ -1.26
VRK1-206ENST00000557222 TAF9Q16594 264 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 METTL11BQ5VVY1 283 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 ASPHD2Q6ICH7 369 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 TBPL2Q6SJ96 375 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 LYPD2Q6UXB3 125 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 GDPGP1Q6ZNW5 385 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 PTCHD4Q6ZW05 846 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 FKBP9P1Q75LS8 142 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 PGAP1Q75T13 922 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 JAZF1Q86VZ6 243 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 SLC7A13Q8TCU3 470 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 NPRL2Q8WTW4 380 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 LRTOMTQ8WZ04 291 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 WDFY2Q96P53 400 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 TBX15Q96SF7 602 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 HOPXQ9BPY8 73 aaPredicted RBP7.17□□□□□ -1.26
VRK1-206ENST00000557222 PCGF1Q9BSM1 259 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 TMEM120AQ9BXJ8 343 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 DPAGT1Q9H3H5 408 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 C16orf95Q9H693 158 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 MARCH7Q9H992 704 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 KCNG2Q9UJ96 466 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 RPS6KA6Q9UK32 745 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 B9D1Q9UPM9 204 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 IER3IP1Q9Y5U9 82 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 ENPP4Q9Y6X5 453 aa7.17□□□□□ -1.26
VRK1-206ENST00000557222 IGLV1-36A0A0B4J1U3 117 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 IGHV1-69DA0A0B4J2H0 117 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 LOC100653049A0A140TA62 436 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 UNC119BA6NIH7 251 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 CXCR6O00574 342 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 IDH3BO43837 385 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 KRT34O76011 436 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 ZNF682O95780 498 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 IGHV1-69P01742 117 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 HLA-DPB1P04440 258 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 H1F0P07305 194 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 RHCEP18577 417 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 IER3P46695 156 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 OMPP47874 163 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 TPTEP56180 551 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 PROK1P58294 105 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 FAM201AQ5SY85 155 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 SLC18B1Q6NT16 456 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 SMARCD3Q6STE5 483 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 TSEN54Q7Z6J9 526 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 ZBTB46Q86UZ6 589 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 SLC15A3Q8IY34 581 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 ZSCAN4Q8NAM6 433 aaPredicted RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 BHLHE23Q8NDY6 225 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 SLC26A10Q8NG04 563 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 OR2AJ1Q8NGZ0 328 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 RP9Q8TA86 221 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 SPRYD4Q8WW59 207 aaPredicted RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 TAF15Q92804 592 aaKnown RBP eCLIP7.16□□□□□ -1.26
VRK1-206ENST00000557222 RSRC1Q96IZ7 334 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 TECTBQ96PL2 329 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 PITX2Q99697 317 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 ATF6BQ99941 703 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 RBM4BQ9BQ04 359 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 SIRPDQ9H106 197 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 RERGLQ9H628 205 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 OPA3Q9H6K4 179 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 VIPAS39Q9H9C1 493 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 CMTM6Q9NX76 183 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 MRPL15Q9P015 296 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 KAAG1Q9UBP8 84 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 CYB5R1Q9UHQ9 305 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 TMCC3Q9ULS5 477 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 AURKCQ9UQB9 309 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 CAB39Q9Y376 341 aaPredicted RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 FAM32AQ9Y421 112 aaKnown RBP7.16□□□□□ -1.26
VRK1-206ENST00000557222 KPTNQ9Y664 436 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
VRK1-206ENST00000557222 NOTCH3Q9UM47 2321 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 C5orf63A6NC05 138 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 OOEPA6NGQ2 149 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 CD300LBA8K4G0 201 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 F5H5K5 113 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 DCTN6O00399 190 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 SOCS2O14508 198 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 GSTA4O15217 222 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 ADAM20O43506 726 aa7.15□□□□□ -1.26
VRK1-206ENST00000557222 GPR137BO60478 399 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms