RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 TRBV2A0A0J9YWF9 115 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 M0R233 179 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 LALBAP00709 142 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 CD8AP01732 235 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 IGHV3-13P01766 116 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 HSMCR30P0CW71 290 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 NAT2P11245 290 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 SELEP16581 610 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 CDKN1AP38936 164 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 ALKBH1Q13686 389 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 MOGQ16653 247 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 OR56B2PQ8NGI1 322 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 GTF3AQ92664 365 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 LURAP1Q96LR2 239 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 REPIN1Q9BWE0 567 aaKnown RBP12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 CACNG6Q9BXT2 260 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 OPA3Q9H6K4 179 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 MSL2Q9HCI7 577 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 GPR160Q9UJ42 338 aa12.02□□□□□ -0.49
VIPAS39-208ENST00000556412 A0A0U1RQV5 110 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 hCG_38984A0A1B0GV85 526 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 A0A1B0GVI7 797 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 CD300LBA8K4G0 201 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 TNFAIP8O95379 198 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 RAF1P04049 648 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 GSK3AP49840 483 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 FAM3AP98173 230 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 IRF3Q14653 427 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 KCTD21Q4G0X4 260 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 RNLSQ5VYX0 342 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 ZCCHC24Q8N2G6 241 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 HAVCR2Q8TDQ0 301 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 SPSB4Q96A44 273 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 TPK1Q9H3S4 243 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 EDARQ9UNE0 448 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 PMF1-BGLAPU3KQ54 211 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 PKDREJQ9NTG1 2253 aa12.01□□□□□ -0.49
VIPAS39-208ENST00000556412 SYT7O43581 403 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 SPRY3O43610 288 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 LILRA1O75019 489 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 UBCP0CG48 685 aaKnown RBP12□□□□□ -0.49
VIPAS39-208ENST00000556412 KITLGP21583 273 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 TGM4P49221 684 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 EVX1P49640 407 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 SLC3A1Q07837 685 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 DOC2BQ14184 412 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 SPHARQ15513 63 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 FDX2Q6P4F2 183 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 RPL22L1Q6P5R6 122 aaKnown RBP12□□□□□ -0.49
VIPAS39-208ENST00000556412 EGFL6Q8IUX8 553 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF485Q8NCK3 441 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 OR5AK2Q8NH90 309 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 PDCD1LG2Q9BQ51 273 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 CXorf56Q9H5V9 222 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 ST6GALNAC2Q9UJ37 374 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF391Q9UJN7 358 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 SIRT4Q9Y6E7 314 aaPredicted RBP12□□□□□ -0.49
VIPAS39-208ENST00000556412 FBN2P35556 2912 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 ZFPL1O95159 310 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 CD53P19397 219 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 DNASE1P24855 282 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF81P51508 661 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 CCR9P51686 369 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 TAS2R43P59537 309 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 CDK5R1Q15078 307 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 CCDC58Q4VC31 144 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 C11orf71Q6IPW1 123 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 ZNF773Q6PK81 442 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 DCHS2Q6V1P9 2916 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 SPARTQ8N0X7 666 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 SVOPQ8N4V2 548 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 PIGTQ969N2 578 aa12□□□□□ -0.49
VIPAS39-208ENST00000556412 BAHCC1Q9P281 2608 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 ZSCAN5BA6NJL1 495 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 OR4C45A6NMZ5 311 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 ANKRD30BLA7E2S9 258 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 IQCF6A8MYZ5 107 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 MTRF1O75570 445 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 CELP19835 753 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 MMP15P51511 669 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 EMX1Q04741 257 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 TBCEQ15813 527 aaPredicted RBP11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 ZMAT1Q5H9K5 638 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 TMEM244Q5VVB8 128 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 DOK3Q7L591 496 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 SEMA6DQ8NFY4 1073 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 OR8G5Q8NG78 346 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 OR2Z1Q8NG97 314 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 OR10AD1Q8NGE0 317 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 PAPOLGQ9BWT3 736 aaKnown RBP11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 MS4A5Q9H3V2 200 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 PLEKHA1Q9HB21 404 aa11.99□□□□□ -0.49
VIPAS39-208ENST00000556412 ACOT13Q9NPJ3 140 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms