RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CYR61O00622 381 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ALOX12BO75342 701 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 EML2O95834 649 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CD79AP11912 226 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 OTX2P32243 289 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF121P58317 390 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 PCBD1P61457 104 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 PPP1CAP62136 330 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 GGTLC2Q14390 218 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 TOMM34Q15785 309 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CBLN2Q8IUK8 224 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 RBMXL1Q96E39 390 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 SEH1LQ96EE3 360 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 VSTM2LQ96N03 204 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ENY2Q9NPA8 101 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF230Q9UIE0 474 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 G3V3Y1 287 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 TRAPPC2LH3BP13 241 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 RAC2P15153 192 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 PTAFRP25105 342 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 EIF1P41567 113 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ACAA2P42765 397 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 MRPL49Q13405 166 aaKnown RBP13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 TMEM52Q8NDY8 209 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 SEMA6DQ8NFY4 1073 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 STT3BQ8TCJ2 826 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 FRZBQ92765 325 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 OCSTAMPQ9BR26 566 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CNTD2Q9H8S5 307 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 B4GALT7Q9UBV7 327 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 SCN10AQ9Y5Y9 1956 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 C4orf51C9J302 202 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 HRKO00198 91 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 H2AFB1P0C5Y9 115 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CTRB1P17538 263 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF273Q14593 569 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CD226Q15762 336 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 ISXQ2M1V0 245 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 CTRB2Q6GPI1 263 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 SLC25A38Q96DW6 304 aa13.49□□□□□ -0.25
ARHGEF40-207ENST00000556399 PLSCR5A0PG75 271 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 MFSD2BA6NFX1 497 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 CD1AP06126 327 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR5H8P0DN80 308 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 NKX2-1P43699 371 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 SNRPEP62304 92 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 ETFDHQ16134 617 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 PNLIPRP3Q17RR3 467 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 NPAS1Q99742 590 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 RAB18Q9NP72 206 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 A6NLC8 198 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 MPZL1O95297 269 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 MSR1P21757 451 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 FPR2P25090 351 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 PPIAP62937 165 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 SKA3Q8IX90 412 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR52N4Q8NGI2 321 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 STRAPQ9Y3F4 350 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF638Q14966 1978 aaKnown RBP13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 XRCC2O43543 280 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 RAB32Q13637 225 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 ATG4DQ86TL0 474 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 PPP1R3BQ86XI6 285 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 KIRREL1Q96J84 757 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 LRRC3BQ96PB8 259 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
ARHGEF40-207ENST00000556399 SFT2D2O95562 160 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 DCDP81605 110 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZSCAN4Q8NAM6 433 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR51A2Q8NGJ7 313 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR6C1Q96RD1 312 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 AK3Q9UIJ7 227 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 KLHDC2Q9Y2U9 406 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 LOC285556D6RIA3 1793 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 ASCC3Q8N3C0 2202 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 PATJQ8NI35 1801 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 SBF1O95248 1867 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 MBTPS2O43462 519 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 TAF9Q16594 264 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 HAGHQ16775 308 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 PSMF1Q92530 271 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 BCO1Q9HAY6 547 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 OTOL1A6NHN0 477 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 EIF1BO60739 113 aaKnown RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 PIGPP57054 158 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 IKZF1Q13422 519 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 PLXDC2Q6UX71 529 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 AAED1Q7RTV5 226 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 FAM221AA4D161 298 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 ZNF724A8MTY0 619 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 EPPINO95925 133 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 RD3LP0DJH9 198 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 CDAP32320 146 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 RGS7BPQ6MZT1 257 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 DPPA2Q7Z7J5 298 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR5AP2Q8NGF4 316 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 GPX8Q8TED1 209 aa13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 SLC25A43Q8WUT9 341 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF40-207ENST00000556399 ARHGAP5-AS1Q96IT6 56 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms