RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 HAVCR2Q8TDQ0 301 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 TMEM106AQ96A25 262 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 DCSTAMPQ9H295 470 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 MOB1AQ9H8S9 216 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 AKAP6Q13023 2319 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 TRAV8-7A0A075B6U6 113 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 TRIM64BA6NI03 449 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 SYT7O43581 403 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 PLAUP00749 431 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 ISG15P05161 165 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 FAM157BP0CG42 384 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 UBCP0CG48 685 aaKnown RBP9.29□□□□□ -0.92
TDP1-211ENST00000555178 ZNF92Q03936 586 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 HLXQ14774 488 aaPredicted RBP9.29□□□□□ -0.92
TDP1-211ENST00000555178 Q499Y3 187 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 SPATA46Q5T0L3 261 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 MTFR2Q6P444 385 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 GPR148Q8TDV2 347 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 NEUROG1Q92886 237 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 SGK3Q96BR1 496 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 MED18Q9BUE0 208 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 TPK1Q9H3S4 243 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 CRIM1Q9NZV1 1036 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 CRNNQ9UBG3 495 aaPredicted RBP9.29□□□□□ -0.92
TDP1-211ENST00000555178 ATPIF1Q9UII2 106 aa9.29□□□□□ -0.92
TDP1-211ENST00000555178 CLEC18AA5D8T8 446 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 J3QKU1 62 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 SLC22A1O15245 554 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 CDRT1O95170 752 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 IGLV3-1P01715 115 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 COX5BP10606 129 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 ACHEP22303 614 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 RPS19P39019 145 aaKnown RBP9.28□□□□□ -0.92
TDP1-211ENST00000555178 OR10A3P58181 314 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 TNK1Q13470 666 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 ZNF544Q6NX49 715 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 CLEC18BQ6UXF7 455 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 ZNF704Q6ZNC4 412 aaPredicted RBP9.28□□□□□ -0.92
TDP1-211ENST00000555178 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 CCDC36Q8IYA8 594 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 CLEC18CQ8NCF0 446 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 OR1J2Q8NGS2 313 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 OR13C3Q8NGS6 347 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 ADAT3Q96EY9 351 aaPredicted RBP9.28□□□□□ -0.92
TDP1-211ENST00000555178 KCTD7Q96MP8 289 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 SLC30A2Q9BRI3 323 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 PPP1R3EQ9H7J1 279 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 SNTG1Q9NSN8 517 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 HHLA2Q9UM44 414 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 DHDHQ9UQ10 334 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 AMDHD2Q9Y303 409 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 STARD10Q9Y365 291 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 IGHV2OR16-5A0A0B4J2B6 119 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 UCHL1P09936 223 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 ZNF35P13682 527 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 AGAP20933 346 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 ACKR3P25106 362 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 COL8A1P27658 744 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 TRAM1Q15629 374 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 TBC1D28Q2M2D7 210 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 TMEM244Q5VVB8 128 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 UNQ9370/PRO34162Q6UXP9 181 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 COLCA1Q6ZS62 124 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 DNAAF1Q8NEP3 725 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 REEP6Q96HR9 211 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 BARHL1Q9BZE3 327 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 OR10A2Q9H208 303 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 TAS2R4Q9NYW5 299 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 PMF1-BGLAPU3KQ54 211 aa9.28□□□□□ -0.92
TDP1-211ENST00000555178 TRBV5-7A0A0A0MS05 114 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 A0A1B0GVI7 797 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 ATP6V1G2-DDX39BF2Z307 99 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 SMPD2O60906 423 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 SERPINA3P01011 423 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
TDP1-211ENST00000555178 LOXP28300 417 aaPredicted RBP9.27□□□□□ -0.93
TDP1-211ENST00000555178 NAAAQ02083 359 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 BSPH1Q075Z2 132 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 HSD17B12Q53GQ0 312 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 GDPGP1Q6ZNW5 385 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 USP43Q70EL4 1123 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 OR51A2Q8NGJ7 313 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 FGGYQ96C11 551 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 MUCL1Q96DR8 90 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 GFI1Q99684 422 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 BCL7BQ9BQE9 202 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 PTTG3PQ9NZH4 202 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 FZR1Q9UM11 496 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 A0A0U1RQV5 110 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 APOC1P02654 83 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 FAHP16930 419 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 IGFBP2P18065 325 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 ADRA2CP18825 462 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 CCL1P22362 96 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 CD40P25942 277 aa9.27□□□□□ -0.93
TDP1-211ENST00000555178 RBMXP38159 391 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms