RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TCEANCQ8N8B7 351 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 OR56B2PQ8NGI1 322 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 OR11L1Q8NGX0 322 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 OTOSQ8NHW6 89 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 SPATA3Q8NHX4 192 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 PYDC1Q8WXC3 89 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 DVL3Q92997 716 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-213ENST00000554600 DUS3LQ96G46 650 aaKnown RBP8.99□□□□□ -0.97
SHMT2-213ENST00000554600 CENPNQ96H22 339 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-213ENST00000554600 REEP6Q96HR9 211 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 SLC22A4Q9H015 551 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 OR10A2Q9H208 303 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 OPA3Q9H6K4 179 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 ENOPH1Q9UHY7 261 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-213ENST00000554600 ANKRD30BLA7E2S9 258 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 TMEM178BH3BS89 294 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 MDH2P40926 338 aaKnown RBP8.98□□□□□ -0.97
SHMT2-213ENST00000554600 OPRL1P41146 370 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 HCCSP53701 268 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 KPNB1Q14974 876 aaKnown RBP8.98□□□□□ -0.97
SHMT2-213ENST00000554600 DCAF12L2Q5VW00 463 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 KDM4DQ6B0I6 523 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 LRRN1Q6UXK5 716 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 SLC16A9Q7RTY1 509 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 C1orf87Q8N0U7 546 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 MUC20Q8N307 709 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-213ENST00000554600 BOLLQ8N9W6 283 aaKnown RBP8.98□□□□□ -0.97
SHMT2-213ENST00000554600 OR52H1Q8NGJ2 320 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 SIGLEC11Q96RL6 698 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 IL4I1Q96RQ9 567 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 CIB1Q99828 191 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 TTTY10Q9BZA0 68 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 GABARAPL1Q9H0R8 117 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 RIBC2Q9H4K1 309 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 OAZ3Q9UMX2 235 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 KLHDC2Q9Y2U9 406 aa8.98□□□□□ -0.97
SHMT2-213ENST00000554600 PPIAL4EA0A075B759 164 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 A0A0G2JMP0 313 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 A0A0X1KG70 313 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 A6NLC8 198 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 ZAR1LA6NP61 321 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 RNF212BA8MTL3 300 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 PPIAL4DF5H284 164 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 PSMD9O00233 223 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 GMDSO60547 372 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 FAM20BO75063 409 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 FOXH1O75593 365 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 PNPP00491 289 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 GRPP07492 148 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 PPIAL4FP0DN26 164 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 RPS2P15880 293 aaKnown RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 SLC2A5P22732 501 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 CFL1P23528 166 aaKnown RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 EPHA2P29317 976 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 GNALP38405 381 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 MAB21L1Q13394 359 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 TMEM155Q4W5P6 130 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 ESCO2Q56NI9 601 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 FAM201AQ5SY85 155 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 SLX4IPQ5VYV7 408 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 KCTD18Q6PI47 426 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 BCDIN3DQ7Z5W3 292 aaKnown RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 LRRC28Q86X40 367 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 C10orf67Q8IYJ2 551 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 OR4M2Q8NGB6 313 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 OR8S1Q8NH09 359 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 TMEM163Q8TC26 289 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 SGK3Q96BR1 496 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 CNN2Q99439 309 aaKnown RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 TEAD3Q99594 435 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 MDFIQ99750 246 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 YIPF3Q9GZM5 350 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 OCEL1Q9H607 264 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 METTL17Q9H7H0 456 aaPredicted RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 FN3KRPQ9HA64 309 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 PATZ1Q9HBE1 687 aaKnown RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 MRPL15Q9P015 296 aaKnown RBP8.97□□□□□ -0.97
SHMT2-213ENST00000554600 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 IKZF2Q9UKS7 526 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 GTF2A1LQ9UNN4 478 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 PPIAL4AQ9Y536 164 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 LRP12Q9Y561 859 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 ORC6Q9Y5N6 252 aa8.97□□□□□ -0.97
SHMT2-213ENST00000554600 hCG_1807616A0A1W2PRN6 198 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 CCDC182A6NF36 153 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 PHF1O43189 567 aaPredicted RBP8.96□□□□□ -0.98
SHMT2-213ENST00000554600 ALOX5APP20292 161 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 DDOSTP39656 456 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 PMELP40967 661 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 CD200P41217 278 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 GSK3AP49840 483 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 ACTR3P61158 418 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 FAM3AP98173 230 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 MZT1Q08AG7 82 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 MPPED2Q15777 294 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 RHOUQ7L0Q8 258 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 MEPCEQ7L2J0 689 aaKnown RBP8.96□□□□□ -0.98
SHMT2-213ENST00000554600 COMMD2Q86X83 199 aa8.96□□□□□ -0.98
SHMT2-213ENST00000554600 CELF2-AS1Q8N7Q2 184 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms