RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 C6orf136Q5SQH8 315 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 MRPL2Q5T653 305 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ANXA8L1Q5VT79 327 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CARD17Q5XLA6 110 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 OR4F3Q6IEY1 312 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM53Q6P2H8 277 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 C6orf89Q6UWU4 347 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 UNQ6126/PRO20091Q6UXV3 157 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PEX5LQ8IYB4 626 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 C10orf67Q8IYJ2 551 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 C1orf174Q8IYL3 243 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CLECL1Q8IZS7 167 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ANKFN1Q8N957 763 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 FNDC5Q8NAU1 212 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 OR4A15Q8NGL6 344 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 OR6N1Q8NGY5 312 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 OR52P1PQ8NH57 321 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 PNPT1Q8TCS8 783 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 TWIST2Q8WVJ9 160 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 UBLCP1Q8WVY7 318 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 SSMEM1Q8WWF3 244 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 SLC47A1Q96FL8 570 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 THOC1Q96FV9 657 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ATP6V1G3Q96LB4 118 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 EMC6Q9BV81 110 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 ULBP2Q9BZM5 246 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 SLC19A3Q9BZV2 496 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 FAM234AQ9H0X4 552 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 SLC38A1Q9H2H9 487 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 C16orf95Q9H693 158 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 RNF121Q9H920 327 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 MARCH7Q9H992 704 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 TCF7L2Q9NQB0 619 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM106BQ9NUM4 274 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 NECAP2Q9NVZ3 263 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 EIF3KQ9UBQ5 218 aaKnown RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 MARCOQ9UEW3 520 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-228ENST00000554592 EMCNQ9ULC0 261 aa4.02□□□□□ -1.77
ATXN3-228ENST00000554592 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 A0A087WUJ7 227 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TRAV40A0A0B4J280 105 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 IQCMA0A1B0GVH7 501 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 H3BNX3 289 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 NDUFAB1O14561 156 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 ADAM20O43506 726 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MGRN1O60291 552 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GPR137BO60478 399 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 PLIN3O60664 434 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GLRA3O75311 464 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MFN2O95140 757 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 FARS2O95363 451 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TGDSO95455 350 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 FAM107AO95990 144 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MELTFP08582 738 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 RPS4Y1P22090 263 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GCAP28676 217 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 CHI3L1P36222 383 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MDH1P40925 334 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MDH2P40926 338 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 CSNK1A1P48729 337 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MMP15P51511 669 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SEC61A1P61619 476 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 BTG1P62324 171 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GNGT1P63211 74 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MRPS34P82930 218 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 EMX2Q04743 252 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GLO1Q04760 184 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MAD2L1Q13257 205 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SYPL1Q16563 259 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SLC36A2Q495M3 483 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TTMPQ5BVD1 217 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 CEP85LQ5SZL2 805 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 THEM4Q5T1C6 240 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GPR157Q5UAW9 335 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 C5orf46Q6UWT4 87 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GDPGP1Q6ZNW5 385 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TRMT10CQ7L0Y3 403 aaKnown RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 MUC20Q8N307 709 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SLC22A24Q8N4F4 322 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF283Q8N7M2 679 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 CCDC63Q8NA47 563 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 ZSCAN4Q8NAM6 433 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-228ENST00000554592 ICA1LQ8NDH6 482 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 OR8J2Q8NGG1 315 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 OR1J1Q8NGS3 322 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SLC38A4Q969I6 547 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TAAR8Q969N4 342 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 GRAMD2BQ96HH9 432 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TXNDC15Q96J42 360 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 PLEKHA8Q96JA3 519 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 SAMD8Q96LT4 415 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 ZIM3Q96PE6 472 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 C1orf50Q9BV19 199 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM109Q9BVC6 243 aa4.01□□□□□ -1.77
ATXN3-228ENST00000554592 RBM38Q9H0Z9 239 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms