RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 BNIP1Q12981 228 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 MAB21L1Q13394 359 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 GINS1Q14691 196 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 TAF13Q15543 124 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 GLYATL3Q5SZD4 288 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 USP43Q70EL4 1123 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 TIGD4Q8IY51 512 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 IQCF1Q8N6M8 205 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 SPERTQ8NA61 448 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR6N2Q8NGY6 317 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZFAND2BQ8WV99 257 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 SPSB4Q96A44 273 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 TEX12Q9BXU0 123 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 SLC25A19Q9HC21 320 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 CENPMQ9NSP4 180 aa8.74□□□□□ -1.01
PTCD2P1-201ENST00000554393 LOC105371242A0A075B767 164 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 GGT3PA6NGU5 568 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 CEACAM18A8MTB9 384 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 PRR23D1E9PI22 279 aaPredicted RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ATP5HO75947 161 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 FSHBP01225 129 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 HLA-DPB1P04440 258 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 PRR23D2P0DMB1 279 aaPredicted RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 IRF2P14316 349 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF12P17014 697 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 EPHA1P21709 976 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 CFL1P23528 166 aaKnown RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZFP36P26651 326 aaKnown RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 POU1F1P28069 291 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 HSD11B1P28845 292 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 PRKXP51817 358 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 MZT1Q08AG7 82 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 EIF2B1Q14232 305 aaKnown RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR8G1Q15617 311 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF404Q494X3 552 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ESCO2Q56NI9 601 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 SLC35D3Q5M8T2 416 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 FAHD1Q6P587 224 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 DPY19L4Q7Z388 723 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 MOGAT3Q86VF5 341 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ERI1Q8IV48 349 aaKnown RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 PARP8Q8N3A8 854 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR52H1Q8NGJ2 320 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR11L1Q8NGX0 322 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR2AE1Q8NHA4 323 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF420Q8TAQ5 688 aaPredicted RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 NANPQ8TBE9 248 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF418Q8TF45 676 aaPredicted RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ADAT1Q9BUB4 502 aaKnown RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 ABHD6Q9BV23 337 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 CADM1Q9BY67 442 aaKnown RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 MMADHCQ9H3L0 296 aaPredicted RBP8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 C7orf69Q9H7B7 122 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 MED20Q9H944 212 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 TMEM165Q9HC07 324 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 MIOXQ9UGB7 285 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 OPN4Q9UHM6 478 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 PKD1L1Q8TDX9 2849 aa8.73□□□□□ -1.01
PTCD2P1-201ENST00000554393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 CYB5R3P00387 301 aaPredicted RBP8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 WNT2P09544 360 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 CA6P23280 308 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 PMELP40967 661 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 OPRL1P41146 370 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 CX3CR1P49238 355 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 HNRNPA0Q13151 305 aaKnown RBP8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 SNCBQ16143 134 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 PLBD1Q6P4A8 553 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 ZNF771Q7L3S4 317 aaPredicted RBP8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 PRSS45Q7RTY3 260 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 HS3ST5Q8IZT8 346 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 DEFB108BQ8NET1 73 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 SEMA6DQ8NFY4 1073 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 OTOSQ8NHW6 89 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 UTP4Q969X6 686 aaKnown RBP8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 OTULINQ96BN8 352 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 NEIL1Q96FI4 390 aaPredicted RBP8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 PLEKHA8Q96JA3 519 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR51V1Q9H2C8 321 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 RGCCQ9H4X1 137 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 FN3KRPQ9HA64 309 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 NTN4Q9HB63 628 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 TRIM36Q9NQ86 728 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 KIF17Q9P2E2 1029 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 OR5V1Q9UGF6 321 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 PPIAL4AQ9Y536 164 aa8.72□□□□□ -1.01
PTCD2P1-201ENST00000554393 C5orf63A6NC05 138 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 TRAPPC2LH3BP13 241 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 FAM20BO75063 409 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 ANXA2P07355 339 aaKnown RBP8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 LYNP07948 512 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 H2BFMP0C1H6 154 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 PPIAL4GP0DN37 164 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 SLC2A1P11166 492 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 RPS2P15880 293 aaKnown RBP8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 ADRA2CP18825 462 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 PRKACGP22612 351 aa8.71□□□□□ -1.02
PTCD2P1-201ENST00000554393 SLC2A5P22732 501 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms