RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 VASH1Q7L8A9 365 aaPredicted RBP11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 DPPA2Q7Z7J5 298 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 MDP1Q86V88 176 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 GLCCI1Q86VQ1 547 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF584Q8IVC4 421 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 GJC3Q8NFK1 279 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 OR2AJ1Q8NGZ0 328 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 AKR7LQ8NHP1 331 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 OR5M11Q96RB7 305 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 NARFLQ9H6Q4 476 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 LPAR2Q9HBW0 351 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 DDX28Q9NUL7 540 aaKnown RBP11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 CAB39Q9Y376 341 aaPredicted RBP11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 CMAHPQ9Y471 501 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 TIMM10BQ9Y5J6 103 aa11.97□□□□□ -0.49
SPTLC2-202ENST00000554365 B4DSR2 109 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 SGCEO43556 437 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 SRSF10O75494 262 aaKnown RBP11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 RGS9O75916 674 aaPredicted RBP11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 UBL3O95164 117 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 LALBAP00709 142 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 LCKP06239 509 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 CD79AP11912 226 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 ATP6V1B1P15313 513 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 RAB1AP62820 205 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 SCRN3Q0VDG4 424 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 PABPC1L2AQ5JQF8 200 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 ELFN2Q5R3F8 820 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 KCTD8Q6ZWB6 473 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 CCDC36Q8IYA8 594 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 ZNF679Q8IYX0 411 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 SYS1Q8N2H4 156 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 KLHL36Q8N4N3 616 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 CPEB3Q8NE35 698 aaKnown RBP11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 SPRYD4Q8WW59 207 aaPredicted RBP11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 PELI1Q96FA3 418 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 C4orf36Q96KX1 117 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 MRPS26Q9BYN8 205 aaKnown RBP11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 ELOVL3Q9HB03 270 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 FBXL3Q9UKT7 428 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 LRP12Q9Y561 859 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 SNX5Q9Y5X3 404 aa11.96□□□□□ -0.49
SPTLC2-202ENST00000554365 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ZNF878C9JN71 531 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 E9PI62 339 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 J3QLW9 94 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 MYL12BO14950 172 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 DOK2O60496 412 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 SULT1C4O75897 302 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ZNF19P17023 458 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 JUNBP17275 347 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ANOS1P23352 680 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 WNT4P56705 351 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ACTA2P62736 377 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ACTG1P63261 375 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ACTG2P63267 376 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 UBE2UQ5VVX9 321 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 TMEM53Q6P2H8 277 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 KCTD18Q6PI47 426 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 DEGS2Q6QHC5 323 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 PLEKHG7Q6ZR37 379 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 RHOUQ7L0Q8 258 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 SVOPQ8N4V2 548 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 IL17RDQ8NFM7 739 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 OR1F12Q8NHA8 337 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 SNX33Q8WV41 574 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 COQ7Q99807 217 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 MND1Q9BWT6 205 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 MRPL37Q9BZE1 423 aaKnown RBP11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 HDHD2Q9H0R4 259 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 RNF121Q9H920 327 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 CENPMQ9NSP4 180 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ACOXLQ9NUZ1 547 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 PLEK2Q9NYT0 353 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 ERGIC3Q9Y282 383 aa11.95□□□□□ -0.5
SPTLC2-202ENST00000554365 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 A0A0A6YYJ9 748 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 M0R233 179 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 WIPF1O43516 503 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 SPRY1O43609 319 aaPredicted RBP11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 INMTO95050 263 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 TFAP2AP05549 437 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 DBHP09172 617 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 COX5BP10606 129 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 NR4A1P22736 598 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 ALDH3B1P43353 468 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 GPR6P46095 362 aaPredicted RBP11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 RAB39AQ14964 217 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 SPHARQ15513 63 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 MSMPQ1L6U9 139 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 GSG1Q2KHT4 349 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 TMPRSS11AQ6ZMR5 421 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 ZNF367Q7RTV3 350 aa11.94□□□□□ -0.5
SPTLC2-202ENST00000554365 KRT77Q7Z794 578 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms