RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FOXL2NBQ6ZUU3 175 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 RFPL4BQ6ZWI9 263 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 TRAPPC6BQ86SZ2 158 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 SLC51BQ86UW2 128 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 FJX1Q86VR8 437 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 ARMC10Q8N2F6 343 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 OR5M8Q8NGP6 311 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 OR13C8Q8NGS7 320 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 OR6K3Q8NGY3 331 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 OR51E1Q8TCB6 317 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 IMMP1LQ96LU5 166 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 PNRC2Q9NPJ4 139 aaKnown RBP11.42□□□□□ -0.58
SHMT2-205ENST00000553474 IFT46Q9NQC8 304 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 ASH2LQ9UBL3 628 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 CEP250Q9BV73 2442 aa11.42□□□□□ -0.58
SHMT2-205ENST00000553474 A0A0U1RQV5 110 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 A0A1B0GW55 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 A0A1W2PNR3 127 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 D6RAR5 112 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 M0QYG6 137 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 LMX1BO60663 402 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 IL2RAP01589 272 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4L2P0CJ85 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4L3P0CJ86 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4L4P0CJ87 422 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4L5P0CJ88 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4L6P0CJ89 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4L7P0CJ90 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 MSR1P21757 451 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ALDH3B1P43353 468 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CBX5P45973 191 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF121P58317 390 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 TAS2R31P59538 309 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DHRS2Q13268 280 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ARL6IP1Q15041 203 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 LCN10Q6JVE6 187 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 GSG1LQ6UXU4 331 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ABHD12BQ7Z5M8 362 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ANGPTL5Q86XS5 388 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 GJC3Q8NFK1 279 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 OR8B12Q8NGG6 310 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 PAQR8Q8TEZ7 354 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 SLC6A7Q99884 636 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ARL6Q9H0F7 186 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 NELFAQ9H3P2 528 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 OCIAD1Q9NX40 245 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 DUX4Q9UBX2 424 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ANAPC10Q9UM13 185 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 FXYD6-FXYD2A0A087WZ82 144 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 LOC101059948A0A1B0GTJ6 334 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 GJE1A6NN92 205 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 IGLV3-1P01715 115 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 IGHEP01854 428 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 SLC25A4P12235 298 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CD34P28906 385 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CASRP41180 1078 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CX3CR1P49238 355 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 SSR4P51571 173 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CXADRP78310 365 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 FOXK1P85037 733 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ECH1Q13011 328 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 BAMBIQ13145 260 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 AANATQ16613 207 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 C2orf68Q2NKX9 166 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 SCGB2B2Q4G0G5 96 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 OR10K2Q6IF99 312 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 Q6ZSR3 168 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 LYG2Q86SG7 212 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 NAA40Q86UY6 237 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 BEST3Q8N1M1 668 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 ARRDC1Q8N5I2 433 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 PNLDC1Q8NA58 520 aaKnown RBP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CHST4Q8NCG5 386 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 RELTQ969Z4 430 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 URM1Q9BTM9 101 aaKnown RBP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CHST6Q9GZX3 395 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 FXYD6Q9H0Q3 95 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 GPR84Q9NQS5 396 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 FARSAQ9Y285 508 aaKnown RBP11.41□□□□□ -0.58
SHMT2-205ENST00000553474 SESN1Q9Y6P5 492 aa11.41□□□□□ -0.58
SHMT2-205ENST00000553474 CEACAM18A8MTB9 384 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 I3L521 148 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 STK17BO94768 372 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 HLA-AP01891 365 aaKnown RBP11.4□□□□□ -0.58
SHMT2-205ENST00000553474 IFNA6P05013 189 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 COX6A1P12074 109 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 MGMTP16455 207 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 ZBTB25P24278 435 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 SFTPDP35247 375 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 CSNK1A1P48729 337 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 MC2RQ01718 297 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 LY6G6FQ5SQ64 297 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 DCAF12L2Q5VW00 463 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 RTL6Q6ICC9 239 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 ZNF101Q8IZC7 436 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms