RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 FN3KQ9H479 309 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 EFCAB1Q9HAE3 211 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 ADA2Q9NZK5 511 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 SIGLEC7Q9Y286 467 aa8.26□□□□□ -1.09
ACTN1-208ENST00000553370 CMYA5Q8N3K9 4069 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 TRAV38-1A0A0B4J264 116 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 TRBV4-1A0A0J9YWV2 114 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 ZNF879B4DU55 563 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 M0R135 149 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 OR10H3O60404 316 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 CCDC22O60826 627 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 DIRAS1O95057 198 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 GADD45GO95257 159 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 ACSM4P0C7M7 580 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 CFHR2P36980 270 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 CD200P41217 278 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 GATA4P43694 442 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 COX10Q12887 443 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 KCNMB1Q16558 191 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 HSP90B2PQ58FF3 399 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 ZNF620Q6ZNG0 422 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 CFAP77Q6ZQR2 320 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 SDR9C7Q8NEX9 313 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 PROKR2Q8NFJ6 384 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 OR8S1Q8NH09 359 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 ST8SIA4Q92187 359 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 LHX4Q969G2 390 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 ZNF799Q96GE5 643 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 NMNAT3Q96T66 252 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 COPS4Q9BT78 406 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 CHIAQ9BZP6 476 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 C1orf123Q9NWV4 160 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 ONECUT1Q9UBC0 465 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 B9D1Q9UPM9 204 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 FAM96BQ9Y3D0 163 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 MMP24Q9Y5R2 645 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 POMT1Q9Y6A1 747 aa8.25□□□□□ -1.09
ACTN1-208ENST00000553370 IGLV1-36A0A0B4J1U3 117 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 OOEPA6NGQ2 149 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 C22orf46C9J442 243 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 LGALS8O00214 317 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 GMDSO60547 372 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 PTP4A3O75365 173 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-208ENST00000553370 TXNDC12O95881 172 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 LIPFP07098 398 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 GRPP07492 148 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 SFTPBP07988 381 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 MELTFP08582 738 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 RAB6AP20340 208 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 OMPP47874 163 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 PAX2Q02962 417 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 LCE2AQ5TA79 106 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-208ENST00000553370 SLC18B1Q6NT16 456 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 PDZD9Q8IXQ8 264 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 OR6V1Q8N148 313 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 TMEM86BQ8N661 226 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 SLC26A10Q8NG04 563 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 OR2AE1Q8NHA4 323 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 Q8TCH9 128 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 RNF141Q8WVD5 230 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 OR52D1Q9H346 318 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 SPAG4Q9NPE6 437 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 ACOXLQ9NUZ1 547 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 C14orf119Q9NWQ9 140 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 KCNG2Q9UJ96 466 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 CAB39Q9Y376 341 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-208ENST00000553370 RNF114Q9Y508 228 aa8.24□□□□□ -1.09
ACTN1-208ENST00000553370 IGHV1-69DA0A0B4J2H0 117 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 CLPSL1A2RUU4 121 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 ANKRD30BLA7E2S9 258 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 CD300LBA8K4G0 201 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 DCTN6O00399 190 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 NDUFA2O43678 99 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 IGHV1-69P01742 117 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 GYPAP02724 150 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 SPARCP09486 303 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 HIST1H1CP16403 213 aaKnown RBP8.23□□□□□ -1.09
ACTN1-208ENST00000553370 GRK5P34947 590 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 PMELP40967 661 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 PSME3P61289 254 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 HIST1H3AP68431 136 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.23□□□□□ -1.09
ACTN1-208ENST00000553370 SRSF4Q08170 494 aaKnown RBP8.23□□□□□ -1.09
ACTN1-208ENST00000553370 MAB21L1Q13394 359 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 SEC23BQ15437 767 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 MPPED2Q15777 294 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 TIGD6Q17RP2 521 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 RFX4Q33E94 735 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 CLEC12AQ5QGZ9 265 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 SLC35F1Q5T1Q4 408 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 HIST2H3PS2Q5TEC6 136 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 DHRS7BQ6IAN0 325 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-208ENST00000553370 GLYATQ6IB77 296 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 CGB2Q6NT52 195 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 Q6YL49 198 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 HIST2H3AQ71DI3 136 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 CMTM4Q8IZR5 234 aa8.23□□□□□ -1.09
ACTN1-208ENST00000553370 SPERTQ8NA61 448 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms