RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 PDIK1LQ8N165 341 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 COMMD1Q8N668 190 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 ARFGAP2Q8N6H7 521 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 SLC26A10Q8NG04 563 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 OR51G2Q8NGK0 314 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 OR6X1Q8NH79 312 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 RFWD2Q8NHY2 731 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 SLC25A40Q8TBP6 338 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 CNOT9Q92600 299 aaKnown RBP1.76□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM54Q969K7 222 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 ZNF566Q969W8 418 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 HAVCR1Q96D42 359 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 EGLN2Q96KS0 407 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 TSSK3Q96PN8 268 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 TAPBPLQ9BX59 468 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 ULBP2Q9BZM5 246 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 CCDC134Q9H6E4 229 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 REEP4Q9H6H4 257 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 DCLRE1BQ9H816 532 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 C12orf10Q9HB07 376 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 B3GAT2Q9NPZ5 323 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 SCRT2Q9NQ03 307 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 ZCCHC3Q9NUD5 404 aaKnown RBP1.76□□□□□ -2.13
PTCH1-223ENST00000551623 VNN3Q9NY84 501 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 IFNKQ9P0W0 207 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 ERVK-18Q9QC07 812 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 DUX4Q9UBX2 424 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 GLS2Q9UI32 602 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 ATPIF1Q9UII2 106 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 PRPF19Q9UMS4 504 aaKnown RBP1.76□□□□□ -2.13
PTCH1-223ENST00000551623 STK38LQ9Y2H1 464 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 RAP2CQ9Y3L5 183 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 STARD9Q9P2P6 4700 aa1.76□□□□□ -2.13
PTCH1-223ENST00000551623 A0A087WUJ7 227 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 TCRBV9S1A1TA0A576 114 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CFAP73A6NFT4 308 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 IQCF6A8MYZ5 107 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 H3BQF6 201 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 M0R3G1 203 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 LGALS8O00214 317 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CCRL2O00421 344 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 DVL1O14640 695 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 DNALI1O14645 258 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 AIM2O14862 343 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 LSM1O15116 133 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 POLR3GO15318 223 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 HDAC3O15379 428 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MLNRO43193 412 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR4F21O95013 312 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FARS2O95363 451 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 AHSA1O95433 338 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 AGR2O95994 175 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CYB5R3P00387 301 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 HPRP00739 348 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 IFNA6P05013 189 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 C2P06681 752 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 TPM1P09493 284 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PATE4P0C8F1 98 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PGA4P0DJD7 388 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PGA3P0DJD8 388 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PGA5P0DJD9 388 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 UQCRBP14927 111 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 GSTM3P21266 225 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ANOS1P23352 680 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CXCR1P25024 350 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FASP25445 335 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 GTF2E2P29084 291 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 SPRP35270 261 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 APLNRP35414 380 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 HSD17B3P37058 310 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ANP32AP39687 249 aaKnown RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CD200P41217 278 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MAGEA4P43358 317 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MAGEA12P43365 314 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 VDAC2P45880 294 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FNTAP49354 379 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 BMXP51813 675 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 AQP5P55064 265 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PKNOX1P55347 436 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 BLCAPP62952 87 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MFGE8Q08431 387 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MAB21L1Q13394 359 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 NAB1Q13506 487 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CHI3L2Q15782 390 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 NPTX1Q15818 432 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 MS4A18Q3C1V0 323 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 PABPC1L2AQ5JQF8 200 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 C10orf128Q5T292 105 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ATPAF1Q5TC12 328 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FAM27BQ5VT28 67 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 TMEM88Q6PEY1 159 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 LINC00322Q6ZN03 302 aaPredicted RBP1.75□□□□□ -2.13
PTCH1-223ENST00000551623 FOXL2NBQ6ZUU3 175 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 CMC1Q7Z7K0 106 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 ANKRD46Q86W74 232 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OSR2Q8N2R0 312 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 DPP10Q8N608 796 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 OR2C3Q8N628 320 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 NATD1Q8N6N6 113 aa1.75□□□□□ -2.13
PTCH1-223ENST00000551623 LSMEM1Q8N8F7 131 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms