RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MALLQ13021 153 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF154Q13106 437 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 EIF2B1Q14232 305 aaKnown RBP10.88□□□□□ -0.67
NPAS3-209ENST00000551008 LIPNQ5VXI9 398 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 TMEM236Q5W0B7 351 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 PLBD1Q6P4A8 553 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF841Q6ZN19 808 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 SPATA24Q86W54 205 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 KLBQ86Z14 1044 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 ERI1Q8IV48 349 aaKnown RBP10.88□□□□□ -0.67
NPAS3-209ENST00000551008 OR6N2Q8NGY6 317 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 UTP4Q969X6 686 aaKnown RBP10.88□□□□□ -0.67
NPAS3-209ENST00000551008 KCTD12Q96CX2 325 aaKnown RBP10.88□□□□□ -0.67
NPAS3-209ENST00000551008 ZMYND19Q96E35 227 aaPredicted RBP10.88□□□□□ -0.67
NPAS3-209ENST00000551008 INTS14Q96SY0 518 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
NPAS3-209ENST00000551008 SLC25A19Q9HC21 320 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 UFSP2Q9NUQ7 469 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 CTSZQ9UBR2 303 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 DNAJB9Q9UBS3 223 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 PCDHB10Q9UN67 800 aa10.88□□□□□ -0.67
NPAS3-209ENST00000551008 hCG_38984A0A1B0GV85 526 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 PRR32B1ATL7 298 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 TNFRSF13BO14836 293 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 GSC2O15499 205 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 DNAJC8O75937 253 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 POU1F1P28069 291 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 CX3CR1P49238 355 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF121P58317 390 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 FAM3AP98173 230 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 PAX8Q06710 450 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 OR8G1Q15617 311 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 FAHD1Q6P587 224 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF826PQ6ZT77 177 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 USP43Q70EL4 1123 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 SLC16A9Q7RTY1 509 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 BCL6BQ8N143 479 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 MUC20Q8N307 709 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 ZDHHC22Q8N966 263 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 SPRYD4Q8WW59 207 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 C22orf15Q8WYQ4 148 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 SGK3Q96BR1 496 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 C1orf147Q96MC9 270 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 LRCH1Q9Y2L9 728 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 SOX21Q9Y651 276 aaPredicted RBP10.87□□□□□ -0.67
NPAS3-209ENST00000551008 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
NPAS3-209ENST00000551008 CCDC182A6NF36 153 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 GGT3PA6NGU5 568 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 TIPRLO75663 272 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
NPAS3-209ENST00000551008 EGR1P18146 543 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 PSMB10P40306 273 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 DAPP51397 102 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 GRB2P62993 217 aaKnown RBP10.86□□□□□ -0.67
NPAS3-209ENST00000551008 ESCO2Q56NI9 601 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 CPOQ8IVL8 374 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 C11orf53Q8IXP5 236 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 OTOSQ8NHW6 89 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 NANPQ8TBE9 248 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 NEIL1Q96FI4 390 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF48Q96MX3 618 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-209ENST00000551008 SSBP3Q9BWW4 388 aaPredicted RBP10.86□□□□□ -0.67
NPAS3-209ENST00000551008 DNAJC27Q9NZQ0 273 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 MRPL15Q9P015 296 aaKnown RBP10.86□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF69Q9UC07 566 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 PPIAL4AQ9Y536 164 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 N6AMT1Q9Y5N5 214 aa10.86□□□□□ -0.67
NPAS3-209ENST00000551008 IGHV2-70DA0A0C4DH43 119 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 C22orf46C9J442 243 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 PRR23D1E9PI22 279 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-209ENST00000551008 C3orf80F5H4A9 247 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-209ENST00000551008 M0R129 80 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 GNGT2O14610 69 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 XRCC2O43543 280 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 GMDSO60547 372 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 E2F6O75461 281 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 PRR23D2P0DMB1 279 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-209ENST00000551008 ACKR3P25106 362 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 EPHA2P29317 976 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 NAA10P41227 235 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-209ENST00000551008 BLVRAP53004 296 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 HCCSP53701 268 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-209ENST00000551008 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 GCSAMQ8N6F7 178 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
NPAS3-209ENST00000551008 ZFAND2BQ8WV99 257 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 ERGIC1Q969X5 290 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 OTULINQ96BN8 352 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 LYZL4Q96KX0 146 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 TOR3AQ9H497 397 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 SMURF1Q9HCE7 757 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 MIOXQ9UGB7 285 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
NPAS3-209ENST00000551008 PRODHO43272 600 aa10.84□□□□□ -0.67
NPAS3-209ENST00000551008 TBX1O43435 398 aa10.84□□□□□ -0.67
NPAS3-209ENST00000551008 MITFO75030 526 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms