RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 C8orf59Q8N0T1 100 aaPredicted RBP12.73□□□□□ -0.37
GPN3-206ENST00000549963 ACBD7Q8N6N7 88 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 SPSB4Q96A44 273 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 SLC30A2Q9BRI3 323 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 ADI1Q9BV57 179 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 TTTY10Q9BZA0 68 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 CHODLQ9H9P2 273 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 GTF2A1LQ9UNN4 478 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 EXOGQ9Y2C4 368 aaKnown RBP12.73□□□□□ -0.37
GPN3-206ENST00000549963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.72□□□□□ -0.37
GPN3-206ENST00000549963 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 LOC110117498-PIK3R3F6TDL0 507 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
GPN3-206ENST00000549963 GMDSO60547 372 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 INHBBP09529 407 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 DBTP11182 482 aaKnown RBP12.72□□□□□ -0.37
GPN3-206ENST00000549963 COL8A2P25067 703 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 GIFP27352 417 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 MMP16P51512 607 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 RAB40BQ12829 278 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 OR8G1Q15617 311 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 PRSS45Q7RTY3 260 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
GPN3-206ENST00000549963 COMMD2Q86X83 199 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 KLBQ86Z14 1044 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 CSNK2A3Q8NEV1 391 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 GTF3AQ92664 365 aaKnown RBP12.72□□□□□ -0.37
GPN3-206ENST00000549963 MOB1AQ9H8S9 216 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 MRPL15Q9P015 296 aaKnown RBP12.72□□□□□ -0.37
GPN3-206ENST00000549963 AASSQ9UDR5 926 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
GPN3-206ENST00000549963 IGHV4-30-2A0A087WSY4 118 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 A0A0U1RQV5 110 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 IFNL4K9M1U5 179 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 CDC14BO60729 498 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 MTRF1O75570 445 aaKnown RBP12.71□□□□□ -0.37
GPN3-206ENST00000549963 USF1P22415 310 aaPredicted RBP12.71□□□□□ -0.37
GPN3-206ENST00000549963 GNALP38405 381 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 NR4A2P43354 598 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 MAP2K3P46734 347 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 ACTA2P62736 377 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 ACTG2P63267 376 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 FAM3AP98173 230 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 ZNF91Q05481 1191 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 MED21Q13503 144 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 TMEM255AQ5JRV8 349 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 BCL2L15Q5TBC7 163 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 Q6ZR03 302 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 EGFL6Q8IUX8 553 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 LGALS12Q96DT0 336 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 TIMD4Q96H15 378 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 PBOV1Q9GZY1 135 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 AMBNQ9NP70 447 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 MRM2Q9UI43 246 aaKnown RBP12.71□□□□□ -0.37
GPN3-206ENST00000549963 GNG8Q9UK08 70 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 R4GMQ9 66 aa12.71□□□□□ -0.37
GPN3-206ENST00000549963 DYSFO75923 2080 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 LYNX1G3V0Z9 82 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 PPIHO43447 177 aaKnown RBP12.7□□□□□ -0.38
GPN3-206ENST00000549963 NCR1O76036 304 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 RPP14O95059 124 aaKnown RBP12.7□□□□□ -0.38
GPN3-206ENST00000549963 CLIC3O95833 236 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 LYNX1P0DP58 116 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 ATP6V1B1P15313 513 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 CA6P23280 308 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 GPR6P46095 362 aaPredicted RBP12.7□□□□□ -0.38
GPN3-206ENST00000549963 HSPA13P48723 471 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 GSK3AP49840 483 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 BIVMQ86UB2 503 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 OR8B12Q8NGG6 310 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 OR56B2PQ8NGI1 322 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 CCL17Q92583 94 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 RAB1CQ92928 201 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 OR2V2Q96R30 315 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 SIGLEC11Q96RL6 698 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 ZNF275Q9NSD4 429 aaPredicted RBP12.7□□□□□ -0.38
GPN3-206ENST00000549963 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
GPN3-206ENST00000549963 C14orf119Q9NWQ9 140 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 FAM206AQ9NX38 181 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 NUFIP1Q9UHK0 495 aaKnown RBP12.7□□□□□ -0.38
GPN3-206ENST00000549963 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 PPP1R3CQ9UQK1 317 aa12.7□□□□□ -0.38
GPN3-206ENST00000549963 AKAP9Q99996 3911 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 C5orf63A6NC05 138 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 LRRC30A6NM36 301 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 CLDN25C9JDP6 229 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 MAGEB4O15481 346 aaPredicted RBP12.69□□□□□ -0.38
GPN3-206ENST00000549963 ATP6V1G2O95670 118 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 HEXAP06865 529 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 CHN2P52757 468 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 PRSS12P56730 875 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 ISL1P61371 349 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 ZNF85Q03923 595 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
GPN3-206ENST00000549963 RIN1Q13671 783 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 LIPNQ5VXI9 398 aa12.69□□□□□ -0.38
GPN3-206ENST00000549963 SSX6Q7RTT6 188 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms