RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 FAHD2BQ6P2I3 314 aaPredicted RBP8.21□□□□□ -1.1
HDAC7-229ENST00000549883 LYPD2Q6UXB3 125 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 ZNF826PQ6ZT77 177 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 SLC16A9Q7RTY1 509 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 WDR86Q86TI4 376 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 LRRC28Q86X40 367 aaPredicted RBP8.21□□□□□ -1.1
HDAC7-229ENST00000549883 TCEANCQ8N8B7 351 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 OR51F2Q8NH61 342 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 PPP1R14AQ96A00 147 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 SPSB4Q96A44 273 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 FAHD2AQ96GK7 314 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 LYZL4Q96KX0 146 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 IL4I1Q96RQ9 567 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 TEAD3Q99594 435 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 TMPRSS13Q9BYE2 586 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 GABARAPL1Q9H0R8 117 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 MMP26Q9NRE1 261 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 KRT84Q9NSB2 600 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 LPAR3Q9UBY5 353 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 OAZ3Q9UMX2 235 aa8.21□□□□□ -1.1
HDAC7-229ENST00000549883 TRAV20A0A0B4J274 112 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 CEACAM18A8MTB9 384 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 F5H0A9 414 aaPredicted RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 TRAPPC2LH3BP13 241 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 FAM20BO75063 409 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 CIB2O75838 187 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 RGS9O75916 674 aaPredicted RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 LYNP07948 512 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 H2BFMP0C1H6 154 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 ALOX5APP20292 161 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 HSD11B1P28845 292 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 SRP14P37108 136 aaKnown RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 SLC15A1P46059 708 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 SRP9P49458 86 aaKnown RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 ESRRGP62508 458 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 ELF3P78545 371 aaPredicted RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 SLC3A1Q07837 685 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 OR8G1Q15617 311 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 KRTAP24-1Q3LI83 254 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 CCDC121Q6ZUS5 278 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 SHFQ7M4L6 423 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 ZDHHC13Q8IUH4 622 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 DEFB108BQ8NET1 73 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 DNAJC9Q8WXX5 260 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 UBE2FQ969M7 185 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 RAB39BQ96DA2 213 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 REEP6Q96HR9 211 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 TMEM246Q9BRR3 403 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 FGF23Q9GZV9 251 aaPredicted RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 METTL17Q9H7H0 456 aaPredicted RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 PATZ1Q9HBE1 687 aaKnown RBP8.2□□□□□ -1.1
HDAC7-229ENST00000549883 TMEM165Q9HC07 324 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 OPN4Q9UHM6 478 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 LRP12Q9Y561 859 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
HDAC7-229ENST00000549883 XRCC2O43543 280 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 FCN3O75636 299 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 APOL3O95236 402 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 IFNA2P01563 188 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 WNT2P09544 360 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 EGR1P18146 543 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 ACKR3P25106 362 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 CD80P33681 288 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 MDH2P40926 338 aaKnown RBP8.19□□□□□ -1.1
HDAC7-229ENST00000549883 CD200P41217 278 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 GATA4P43694 442 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 GSK3AP49840 483 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 ACTR3P61158 418 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 MFGE8Q08431 387 aaPredicted RBP8.19□□□□□ -1.1
HDAC7-229ENST00000549883 TIGD6Q17RP2 521 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 DMRTC1Q5HYR2 192 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 SLC35D3Q5M8T2 416 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 AADACL4Q5VUY2 407 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 PLEKHG7Q6ZR37 379 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 PEG10Q86TG7 708 aaKnown RBP8.19□□□□□ -1.1
HDAC7-229ENST00000549883 PHC2Q8IXK0 858 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 C11orf53Q8IXP5 236 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 ZNF454Q8N9F8 522 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 BOLLQ8N9W6 283 aaKnown RBP8.19□□□□□ -1.1
HDAC7-229ENST00000549883 OR8B12Q8NGG6 310 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 TMEM163Q8TC26 289 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 CENPNQ96H22 339 aaPredicted RBP8.19□□□□□ -1.1
HDAC7-229ENST00000549883 PGAM5Q96HS1 289 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 OSBPL10Q9BXB5 764 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 TOR3AQ9H497 397 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 RIBC2Q9H4K1 309 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 ADGRL4Q9HBW9 690 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 AASSQ9UDR5 926 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 RHBDD3Q9Y3P4 386 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 COL6A5A8TX70 2615 aa8.19□□□□□ -1.1
HDAC7-229ENST00000549883 RNF212BA8MTL3 300 aa8.18□□□□□ -1.1
HDAC7-229ENST00000549883 PNPP00491 289 aa8.18□□□□□ -1.1
HDAC7-229ENST00000549883 GRPP07492 148 aa8.18□□□□□ -1.1
HDAC7-229ENST00000549883 HNF1AP20823 631 aa8.18□□□□□ -1.1
HDAC7-229ENST00000549883 PSMA6P60900 246 aaKnown RBP8.18□□□□□ -1.1
HDAC7-229ENST00000549883 CSNK2BP67870 215 aa8.18□□□□□ -1.1
HDAC7-229ENST00000549883 POU4F2Q12837 409 aa8.18□□□□□ -1.1
HDAC7-229ENST00000549883 ZNF181Q2M3W8 571 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms