RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 OR8U9P0C7N5 309 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ZDHHC11BP0C7U3 371 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 PSMC3P17980 439 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 NMUP48645 174 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CSNK1A1P48729 337 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 VSX2P58304 361 aaPredicted RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 TAS2R60P59551 318 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 SLC35B1P78383 322 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 PRR3P79522 188 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 REG3AQ06141 175 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ART3Q13508 389 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ANGPT1Q15389 498 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 GUCA2BQ16661 112 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 TTLL9Q3SXZ7 439 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ABCA11PQ4W5N1 156 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 APOBEC3HQ6NTF7 200 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 SLC25A34Q6PIV7 304 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF493Q6ZR52 646 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 MRPL55Q7Z7F7 128 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 HMGN2P46Q86SG4 172 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ERO1BQ86YB8 467 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 FAM71AQ8IYT1 594 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 C17orf78Q8N4C9 275 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CBR4Q8N4T8 237 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CHST4Q8NCG5 386 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 OR5AR1Q8NGP9 310 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 OR8U1Q8NH10 309 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CLHC1Q8NHS4 586 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ANGPTL6Q8NI99 470 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 OR51E1Q8TCB6 317 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 LGALS14Q8TCE9 139 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 PDCD6IPQ8WUM4 868 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 FRZBQ92765 325 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 MRGPRFQ96AM1 343 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CREB3L1Q96BA8 519 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 BTN2A3PQ96KV6 586 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 TRNT1Q96Q11 434 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ULBP2Q9BZM5 246 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 LINC00597Q9H2U6 94 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CHMP4BQ9H444 224 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CLMPQ9H6B4 373 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 SLC39A1Q9NY26 324 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 GGA2Q9UJY4 613 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 TRAPPC4Q9Y296 219 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 F11RQ9Y624 299 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 MRPS18BQ9Y676 258 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 V9GYY9 64 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 MROH7Q68CQ1 1323 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PDS5BQ9NTI5 1447 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 GABRPO00591 440 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 KMOO15229 486 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 SS18L1O75177 396 aaPredicted RBP1.94□□□□□ -2.1
CCDC38-208ENST00000549876 TRAPPC6AO75865 159 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 RBBP9O75884 186 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 GNAO1P09471 354 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PNMA6AP0CW24 399 aaPredicted RBP1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PGA4P0DJD7 388 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PGA3P0DJD8 388 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PGA5P0DJD9 388 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ERGP11308 486 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 GABRG2P18507 467 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 IL32P24001 234 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 LOXP28300 417 aaPredicted RBP1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PFN2P35080 140 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 MAS1LP35410 378 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ARR3P36575 388 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 NCBP2P52298 156 aaKnown RBP eCLIP1.94□□□□□ -2.1
CCDC38-208ENST00000549876 AP1S2P56377 157 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 OR2B8PP59922 312 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 SIGLEC14Q08ET2 396 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 STX3Q13277 289 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 SYCP1Q15431 976 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ZSCAN26Q16670 478 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 GCSAMLQ5JQS6 135 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 TMEM255AQ5JRV8 349 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 DUPD1Q68J44 220 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 C12orf54Q6X4T0 127 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 STRADAQ7RTN6 431 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 CAMK2N1Q7Z7J9 78 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 STPG2Q8N412 459 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ARRDC1Q8N5I2 433 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 LINC00469Q8N7U9 141 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ZFP41Q8N8Y5 198 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 WDR31Q8NA23 367 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 CCDC54Q8NEL0 328 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 OR10W1Q8NGF6 305 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 OR6K2Q8NGY2 324 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 TMEM239Q8WW34 195 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 CDKL2Q92772 493 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 SGTBQ96EQ0 304 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 CPB2Q96IY4 423 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF681Q96N22 645 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 SCGB3A2Q96PL1 93 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PARP12Q9H0J9 701 aaKnown RBP1.94□□□□□ -2.1
CCDC38-208ENST00000549876 IFI27L2Q9H2X8 130 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 GOLPH3Q9H4A6 298 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 REEP1Q9H902 201 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF226Q9NYT6 803 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 SLC25A37Q9NYZ2 338 aa1.94□□□□□ -2.1
CCDC38-208ENST00000549876 PCYOX1Q9UHG3 505 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms