RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ZNF584Q8IVC4 421 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 CLRN3Q8NCR9 226 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 ZNF248Q8NDW4 579 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 OR52N4Q8NGI2 321 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 OR6K3Q8NGY3 331 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 PHYHIPQ92561 330 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 SLC6A15Q9H2J7 730 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 CHMP1AQ9HD42 196 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 TAS2R8Q9NYW2 309 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 KLK13Q9UKR3 277 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 HIF3AQ9Y2N7 669 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 LRP12Q9Y561 859 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 LOC107986453A0A1B0GWG9 222 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 TMEM200CA6NKL6 621 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 NPIPA5E9PKD4 350 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 ADAP1O75689 374 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 CNR1P21554 472 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 HRH1P35367 487 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 RIDAP52758 137 aaKnown RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 EMP2P54851 167 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 MFAP5Q13361 173 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 HNF4GQ14541 408 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 NAA40Q86UY6 237 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 OTOSQ8NHW6 89 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 NPIPA1Q9UND3 350 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 LOC102723996A0A087X1L8 192 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 TMED7-TICAM2A0A0A6YYA0 188 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 OR6C65A6NJZ3 312 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 MPTX1A8MV57 137 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 F8W036 122 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 H7C2Y5 167 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 ERCC1P07992 297 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 HCKP08631 526 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 H2BFMP0C1H6 154 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 ASCL1P50553 236 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 TAS2R19P59542 299 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 BLOC1S1P78537 153 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 PMPCAQ10713 525 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 IKZF1Q13422 519 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 SLC17A1Q14916 467 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 SGCAQ16586 387 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 RNASE10Q5GAN6 216 aaKnown RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 GLT8D1Q68CQ7 371 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 JMJD6Q6NYC1 403 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 ABHD12BQ7Z5M8 362 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 HSD17B13Q7Z5P4 300 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 TRAPPC6BQ86SZ2 158 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 PUSL1Q8N0Z8 303 aaKnown RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 LRRC75AQ8NAA5 344 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 INO80EQ8NBZ0 244 aaPredicted RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 AGBL5Q8NDL9 886 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 OR51E1Q8TCB6 317 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 CCDC107Q8WV48 283 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 NXT1Q9UKK6 140 aaKnown RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 R4GN57 208 aa9.85□□□□□ -0.83
LINC00661-204ENST00000549354 SPTAN1Q13813 2472 aaKnown RBP9.85□□□□□ -0.83
LINC00661-204ENST00000549354 MGAQ8IWI9 3026 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 IGHV3-64DA0A0J9YX35 117 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 SLC17A2O00624 439 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 NXPH3O95157 252 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 AHSA1O95433 338 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 LDOC1O95751 146 aaPredicted RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 CBR1P16152 277 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 NFYBP25208 207 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 BIDP55957 195 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 TLE3Q04726 772 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 SNTB1Q13884 538 aaKnown RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 FREM1Q5H8C1 2179 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 PHF19Q5T6S3 580 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 AWAT2Q6E213 333 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 PAPD4Q6PIY7 484 aaKnown RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 CPEB2Q7Z5Q1 589 aaKnown RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 MISPQ8IVT2 679 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 C20orf196Q8IYI0 205 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 OR13C8Q8NGS7 320 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 MARCH1Q8TCQ1 289 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ELP5Q8TE02 316 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 GPX8Q8TED1 209 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ASB5Q8WWX0 329 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 MCHR2Q969V1 340 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 HRH4Q9H3N8 390 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 MRPL22Q9NWU5 206 aaKnown RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 GPN3Q9UHW5 284 aaPredicted RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 OR14I1A6ND48 311 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 RPA2P15927 270 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 MGMTP16455 207 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ID4P47928 161 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ACTBP60709 375 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 ACTG1P63261 375 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 RASGEF1BQ0VAM2 473 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 RBM39Q14498 530 aaKnown RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 PLEKHN1Q494U1 663 aaPredicted RBP9.84□□□□□ -0.83
LINC00661-204ENST00000549354 C11orf87Q6NUJ2 197 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 FJX1Q86VR8 437 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 NAXDQ8IW45 347 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 OR10H5Q8NGA6 315 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 THAP6Q8TBB0 222 aa9.84□□□□□ -0.83
LINC00661-204ENST00000549354 DCUN1D4Q92564 292 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms