RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TAF15Q92804 592 aaKnown RBP eCLIP14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 SLAMF6Q96DU3 332 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 TECTBQ96PL2 329 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 MMADHCQ9H3L0 296 aaPredicted RBP14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 SMURF1Q9HCE7 757 aa14.46□□□□□ -0.09
CHMP1A-205ENST00000548650 ZNF878C9JN71 531 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 DCTN3O75935 186 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 SOX14O95416 240 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 CLUP10909 449 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 SPI1P17947 270 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 NPY4RP50391 375 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 PRKXP51817 358 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 SLC25A1P53007 311 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 MXRA7P84157 204 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 ZNF511Q8NB15 262 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 PLPP7Q8NBV4 271 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 KCNJ15Q99712 375 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 TSSK6Q9BXA6 273 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 PRDM13Q9H4Q3 707 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 OPA3Q9H6K4 179 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 MAGIXQ9H6Y5 334 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 UNKLQ9H9P5 680 aaKnown RBP14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 ARMC1Q9NVT9 282 aa14.45□□□□□ -0.1
CHMP1A-205ENST00000548650 C3orf80F5H4A9 247 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 TNFRSF13BO14836 293 aaPredicted RBP14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 FCN3O75636 299 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 SFTPBP07988 381 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 FMO3P31513 532 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 CFHR2P36980 270 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 IL13RA1P78552 427 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 KCNJ8Q15842 424 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 DEFB112Q30KQ8 113 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 TEX30Q5JUR7 227 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 LINC01590Q5TEZ4 76 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 SFRP4Q6FHJ7 346 aaPredicted RBP14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 LCN8Q6JVE9 175 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 ZNF826PQ6ZT77 177 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 GCSAMQ8N6F7 178 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 BOLLQ8N9W6 283 aaKnown RBP14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 OR2T33Q8NG76 320 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 SPSB4Q96A44 273 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 DGCR6LQ9BY27 220 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 ZNF696Q9H7X3 374 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 C1orf123Q9NWV4 160 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 BAIAP2Q9UQB8 552 aa14.44□□□□□ -0.1
CHMP1A-205ENST00000548650 DHRS12A0PJE2 317 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 OOEPA6NGQ2 149 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 ZNF593O00488 134 aaPredicted RBP14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 HOXA3O43365 443 aaPredicted RBP14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 ADAM20O43506 726 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 XRCC2O43543 280 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 MMP9P14780 707 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 OR8B8Q15620 311 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 GPR157Q5UAW9 335 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 RUSC1-AS1Q66K80 236 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 SPATC1Q76KD6 591 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 WDR86Q86TI4 376 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 FAM90A1Q86YD7 464 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 SPERTQ8NA61 448 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 OR6K6Q8NGW6 343 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 TBX15Q96SF7 602 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 PCGF1Q9BSM1 259 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 TRIM36Q9NQ86 728 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 CENPMQ9NSP4 180 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 SAMHD1Q9Y3Z3 626 aaKnown RBP14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 U3KQV3 271 aa14.43□□□□□ -0.1
CHMP1A-205ENST00000548650 A6NLC8 198 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 ZNF879B4DU55 563 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 CX3CR1P49238 355 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 TAF13Q15543 124 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 MICAQ29983 383 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 OR2T5Q6IEZ7 315 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 OR2T29Q8NH02 315 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 MUC13Q9H3R2 512 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 REEP1Q9H902 201 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 ERVK-18Q9QC07 812 aa14.42□□□□□ -0.1
CHMP1A-205ENST00000548650 TRAV38-1A0A0B4J264 116 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 hCG_38984A0A1B0GV85 526 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 RIIAD1A6NNX1 92 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 SRRM5B3KS81 715 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 P2RY10O00398 339 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 LHBP01229 141 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 IFNGP01579 166 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 GRPP07492 148 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 ZNF3P17036 446 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 MDKP21741 143 aaPredicted RBP14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 MNAT1P51948 309 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 BLVRAP53004 296 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 BPIFB3P59826 476 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 GRB2P62993 217 aaKnown RBP14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 TEX36Q5VZQ5 186 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 CD276Q5ZPR3 534 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 C16orf87Q6PH81 154 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 SLC16A9Q7RTY1 509 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 PRSS45Q7RTY3 260 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 ARHGAP24Q8N264 748 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 RNF133Q8WVZ7 376 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 SIRPDQ9H106 197 aa14.41□□□□□ -0.1
CHMP1A-205ENST00000548650 CMC2Q9NRP2 79 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms