RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 ZBTB46Q86UZ6 589 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 PDZD9Q8IXQ8 264 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 SLC15A3Q8IY34 581 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 CMTM4Q8IZR5 234 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 ST8SIA4Q92187 359 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 NMNAT3Q96T66 252 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 C14orf119Q9NWQ9 140 aa16.49■□□□□ 0.23
GATC-202ENST00000548171 hCG_1807616A0A1W2PRN6 198 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 FCN3O75636 299 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 HLA-DQA2P01906 255 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 TROVE2P10155 538 aaKnown RBP eCLIP16.48■□□□□ 0.23
GATC-202ENST00000548171 EEF1B2P24534 225 aaKnown RBP16.48■□□□□ 0.23
GATC-202ENST00000548171 SLC6A6P31641 620 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 ZNF92Q03936 586 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 EGR3Q06889 387 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 BEAN1Q3B7T3 259 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 KPRPQ5T749 579 aaPredicted RBP16.48■□□□□ 0.23
GATC-202ENST00000548171 OR5R1Q8NH85 324 aa16.48■□□□□ 0.23
GATC-202ENST00000548171 RPRD1BQ9NQG5 326 aaKnown RBP16.48■□□□□ 0.23
GATC-202ENST00000548171 GPR37O15354 613 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 ALX3O95076 343 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 GRPP07492 148 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 MUC1P15941 1255 aaPredicted RBP16.47■□□□□ 0.23
GATC-202ENST00000548171 RHCEP18577 417 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 MICBQ29980 383 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 RFX4Q33E94 735 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 SNAI3Q3KNW1 292 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 DRAM2Q6UX65 266 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 ZNF826PQ6ZT77 177 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 REC114Q7Z4M0 266 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 LY6G5BQ8NDX9 201 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 RCN3Q96D15 328 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 MAP6Q96JE9 813 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 OPA3Q9H6K4 179 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 RNPEPL1Q9HAU8 725 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 GMPR2Q9P2T1 348 aaKnown RBP16.47■□□□□ 0.23
GATC-202ENST00000548171 ONECUT1Q9UBC0 465 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 FBLN5Q9UBX5 448 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 CAPN7Q9Y6W3 813 aa16.47■□□□□ 0.23
GATC-202ENST00000548171 TRBV4-1A0A0J9YWV2 114 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 BHLHE40O14503 412 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 SLC22A2O15244 555 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 OTX1P32242 354 aaPredicted RBP16.46■□□□□ 0.23
GATC-202ENST00000548171 GRK5P34947 590 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 SEC23BQ15437 767 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 Q6ZTK2 550 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 OR4K13Q8NH42 304 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 OR2AE1Q8NHA4 323 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 FANK1Q8TC84 345 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 NDUFAF4Q9P032 175 aa16.46■□□□□ 0.23
GATC-202ENST00000548171 OR6C68A6NDL8 312 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 ANKRD61A6NGH8 418 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 IDH3BO43837 385 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 OPN1MWP04001 364 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 OPN1MW2P0DN77 364 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 OPN1MW3P0DN78 364 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 HIST1H1CP16403 213 aaKnown RBP16.45■□□□□ 0.22
GATC-202ENST00000548171 ZNF823P16415 610 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 NOS3P29474 1203 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 HERPUD1Q15011 391 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 GLYATL3Q5SZD4 288 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 C11orf88Q6PI97 169 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 SLC36A1Q7Z2H8 476 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 OR4C15Q8NGM1 316 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 FAM162AQ96A26 154 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 HOPXQ9BPY8 73 aaPredicted RBP16.45■□□□□ 0.22
GATC-202ENST00000548171 SEMA6AQ9H2E6 1030 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 OR52D1Q9H346 318 aa16.45■□□□□ 0.22
GATC-202ENST00000548171 IGHV3OR15-7A0A075B7D8 119 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 G3V4G9 280 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 RNASEK-C17orf49H0YIS7 233 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 NME4O00746 187 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 NDUFAB1O14561 156 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 NPFFO15130 113 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 PAHP00439 452 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 GABRA5P31644 462 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 DDOSTP39656 456 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 GSK3BP49841 420 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 KRT72Q14CN4 511 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 SAMD5Q5TGI4 173 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 SLC35E4Q6ICL7 350 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 OR56B2PQ8NGI1 322 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 RP9Q8TA86 221 aaKnown RBP16.44■□□□□ 0.22
GATC-202ENST00000548171 C12orf43Q96C57 262 aaKnown RBP16.44■□□□□ 0.22
GATC-202ENST00000548171 DHRS1Q96LJ7 313 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 IFT27Q9BW83 186 aa16.44■□□□□ 0.22
GATC-202ENST00000548171 MRPL22Q9NWU5 206 aaKnown RBP16.44■□□□□ 0.22
GATC-202ENST00000548171 ANKRD30BLA7E2S9 258 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 PIN1P1O15428 100 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 NDUFB3O43676 98 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 SLC7A2P52569 658 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 POU4F2Q12837 409 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 PCK2Q16822 640 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 OR8S1Q8NH09 359 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 LRRC29Q8WV35 223 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 CCL13Q99616 98 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 FUZQ9BT04 418 aa16.43■□□□□ 0.22
GATC-202ENST00000548171 NSRP1Q9H0G5 558 aaKnown RBP16.43■□□□□ 0.22
GATC-202ENST00000548171 PPA2Q9H2U2 334 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms