RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 SLC22A4Q9H015 551 aa16.89■□□□□ 0.29
SSH1-207ENST00000547862 MYLK2Q9H1R3 596 aa16.89■□□□□ 0.29
SSH1-207ENST00000547862 BEX1Q9HBH7 125 aa16.89■□□□□ 0.29
SSH1-207ENST00000547862 CENPMQ9NSP4 180 aa16.89■□□□□ 0.29
SSH1-207ENST00000547862 KCNG2Q9UJ96 466 aa16.89■□□□□ 0.29
SSH1-207ENST00000547862 P2RY10O00398 339 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 TBX1O43435 398 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 GYPBP06028 91 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 TSPAN31Q12999 210 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 CD276Q5ZPR3 534 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 Q6YL49 198 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 ZDHHC21Q8IVQ6 265 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 SCCPDHQ8NBX0 429 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 ZNRF4Q8WWF5 429 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 GATAD2BQ8WXI9 593 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 ST8SIA4Q92187 359 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 WDFY2Q96P53 400 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 GORASP2Q9H8Y8 452 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 TBC1D23Q9NUY8 699 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 C1RLQ9NZP8 487 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 CDH10Q9Y6N8 788 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 COMMD3-BMI1R4GMX3 469 aa16.88■□□□□ 0.29
SSH1-207ENST00000547862 TRAV38-1A0A0B4J264 116 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.87■□□□□ 0.29
SSH1-207ENST00000547862 CENPVL3A0A0U1RRI6 287 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 IDH3BO43837 385 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 GMDSO60547 372 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 MMP9P14780 707 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 PRDX6P30041 224 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 RELBQ01201 579 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 OLFML2AQ68BL7 652 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 FGFRL1Q8N441 504 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 PNLDC1Q8NA58 520 aaKnown RBP16.87■□□□□ 0.29
SSH1-207ENST00000547862 OR2T4Q8NH00 348 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 CCT8L2Q96SF2 557 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 NOX4Q9NPH5 578 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 PDP1Q9P0J1 537 aaPredicted RBP16.87■□□□□ 0.29
SSH1-207ENST00000547862 MMP24Q9Y5R2 645 aa16.87■□□□□ 0.29
SSH1-207ENST00000547862 BHLHE40O14503 412 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 ARF6P62330 175 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 DRAM2Q6UX65 266 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 FAM90A1Q86YD7 464 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 SLC37A3Q8NCC5 494 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 OR4C15Q8NGM1 316 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 OR8D4Q8NGM9 314 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 OR8S1Q8NH09 359 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 SLAMF6Q96DU3 332 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 ACOXLQ9NUZ1 547 aa16.86■□□□□ 0.29
SSH1-207ENST00000547862 MRPL15Q9P015 296 aaKnown RBP16.86■□□□□ 0.29
SSH1-207ENST00000547862 A0A1B0GW55 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DVL1O14640 695 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L2P0CJ85 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L3P0CJ86 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L4P0CJ87 422 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L5P0CJ88 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L6P0CJ89 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L7P0CJ90 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 ENTPD1P49961 510 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 BPIFB3P59826 476 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 ELF3P78545 371 aaPredicted RBP16.85■□□□□ 0.29
SSH1-207ENST00000547862 GFOD2Q3B7J2 385 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4L9Q6RFH8 374 aaPredicted RBP16.85■□□□□ 0.29
SSH1-207ENST00000547862 BTN2A1Q7KYR7 527 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 GCSAMQ8N6F7 178 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 ZNF511Q8NB15 262 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 OR6K6Q8NGW6 343 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 FAM71F1Q96KD3 344 aaPredicted RBP16.85■□□□□ 0.29
SSH1-207ENST00000547862 BTBD10Q9BSF8 475 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 SIRPDQ9H106 197 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 PRDM13Q9H4Q3 707 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 TRIM36Q9NQ86 728 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 ONECUT1Q9UBC0 465 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 DUX4Q9UBX2 424 aa16.85■□□□□ 0.29
SSH1-207ENST00000547862 IGHV1-69DA0A0B4J2H0 117 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 A0A0U1RQK1 487 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 A0A1B0GUS0 222 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 TNFRSF13BO14836 293 aaPredicted RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 FCN3O75636 299 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 SOX14O95416 240 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 IGHV1-69P01742 117 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 IGHV4-59P01825 116 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 LIPFP07098 398 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 ANXA2P07355 339 aaKnown RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 CLUP10909 449 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 HSD17B1P14061 328 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 OTX1P32242 354 aaPredicted RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 CX3CR1P49238 355 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 GMFBP60983 142 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 PRB3Q04118 309 aaPredicted RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 PPP1R8Q12972 351 aaKnown RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 CRMP1Q14194 572 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 SAMD4BQ5PRF9 694 aaKnown RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 ZNF362Q5T0B9 420 aaPredicted RBP16.84■□□□□ 0.29
SSH1-207ENST00000547862 RPL13AP3Q6NVV1 102 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 LRRC29Q8WV35 223 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 SSMEM1Q8WWF3 244 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 KCNJ15Q99712 375 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 TRIM15Q9C019 465 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 C14orf119Q9NWQ9 140 aa16.84■□□□□ 0.29
SSH1-207ENST00000547862 DNAJC27Q9NZQ0 273 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms