RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PACRGQ96M98 296 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 TAAR9Q96RI9 348 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 SIGLEC11Q96RL6 698 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 XKRY2A2RUG3 117 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 MFSD2BA6NFX1 497 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 SEC11BP0C7V7 166 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 GPM6BQ13491 265 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 ADPRHL1Q8NDY3 354 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 ANAPC16Q96DE5 110 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CMBLQ96DG6 245 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-212ENST00000546744 OR5V1Q9UGF6 321 aa11.6□□□□□ -0.55
PTCH1-212ENST00000546744 A0A0U1RQS6 177 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 OR5H15A6NDH6 313 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 OR5H1A6NKK0 313 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 H7C1C5 153 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 PLXNB2O15031 1838 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 HNF1AP20823 631 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 SELENOPP49908 381 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 SULT1A2P50226 295 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 FAM27D1Q5T7N8 215 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 TXNIPQ9H3M7 391 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-212ENST00000546744 NTMQ9P121 344 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 SIGLEC7Q9Y286 467 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 NUMA1Q14980 2115 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 LNP1A1A4G5 178 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 OR8U8P0C7N1 319 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 OR10J1P30954 320 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 ZNF611Q8N823 705 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 M1APQ8TC57 530 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 LINC00615Q96LM1 132 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-212ENST00000546744 HDAC8Q9BY41 377 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 PBX4Q9BYU1 374 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 ULBP3Q9BZM4 244 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 PARP12Q9H0J9 701 aaKnown RBP11.59□□□□□ -0.55
PTCH1-212ENST00000546744 B3GAT1Q9P2W7 334 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 MCTS1Q9ULC4 181 aaKnown RBP11.59□□□□□ -0.55
PTCH1-212ENST00000546744 CTAG2O75638 210 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 GJB3O75712 270 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 AVPR2P30518 371 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 PTGER4P35408 488 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 HTR5AP47898 357 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 B2MP61769 119 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 C9orf152Q5JTZ5 239 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 THEM4Q5T1C6 240 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 ALKBH2Q6NS38 261 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 DRAM2Q6UX65 266 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 WDR34Q96EX3 536 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 BARHL1Q9BZE3 327 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 LAT2Q9GZY6 243 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 ALKBH4Q9NXW9 302 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 NXT1Q9UKK6 140 aaKnown RBP11.59□□□□□ -0.55
PTCH1-212ENST00000546744 TRAPPC1Q9Y5R8 145 aa11.59□□□□□ -0.55
PTCH1-212ENST00000546744 A0A1W2PR48 441 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 OTOL1A6NHN0 477 aaPredicted RBP11.58□□□□□ -0.55
PTCH1-212ENST00000546744 PRAMEF26H0Y7S4 382 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 TMPRSS11DO60235 418 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 SULT1A1P50225 295 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 BIDP55957 195 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 PIGPP57054 158 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 TEX30Q5JUR7 227 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 FAM109BQ6ICB4 259 aaPredicted RBP11.58□□□□□ -0.55
PTCH1-212ENST00000546744 CBLN2Q8IUK8 224 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 OR10A7Q8NGE5 316 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 OR51F2Q8NH61 342 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 OR10J5Q8NHC4 309 aa11.58□□□□□ -0.55
PTCH1-212ENST00000546744 A0A0B4J203 849 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 PRSS38A1L453 326 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 PRSS37A4D1T9 235 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 BCL6P41182 706 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 ISXQ2M1V0 245 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 MED25Q71SY5 747 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 NHLRC2Q8NBF2 726 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 SUMF1Q8NBK3 374 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 DMBX1Q8NFW5 382 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 SLAMF6Q96DU3 332 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 PLA2G12AQ9BZM1 189 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 A0A1B0GTL3 188 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 TNFSF12O43508 249 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 CD200P41217 278 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 PWWP2BQ6NUJ5 590 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 LYPD8Q6UX82 237 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 ST8SIA1Q92185 356 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 SHDQ96IW2 340 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 TINAGL1Q9GZM7 467 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-212ENST00000546744 WWTR1Q9GZV5 400 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
PTCH1-212ENST00000546744 GAPDHP04406 335 aaKnown RBP11.58□□□□□ -0.56
PTCH1-212ENST00000546744 CCL5P13501 91 aa11.58□□□□□ -0.56
PTCH1-212ENST00000546744 MVDP53602 400 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms