RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 KLHL13Q9P2N7 655 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 PURGQ9UJV8 347 aaKnown RBP13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ICAM5Q9UMF0 924 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 A0A1W2PR80 420 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ANGPTL7O43827 346 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 RPA2P15927 270 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
HOXC11-202ENST00000546378 BIDP55957 195 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 TLE3Q04726 772 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 AVPI1Q5T686 147 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 S100A13Q99584 98 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ZNF700Q9H0M5 742 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 FN3KRPQ9HA64 309 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 TNFSF18Q9UNG2 199 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 ETV7Q9Y603 341 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 TMEM14AQ9Y6G1 99 aa13.08□□□□□ -0.32
HOXC11-202ENST00000546378 DSPP15924 2871 aaKnown RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 EML5Q05BV3 1969 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 IGHV3-64DA0A0J9YX35 117 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 A0A1W2PPE3 182 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 PRSS37A4D1T9 235 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 TNFP01375 233 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 CSNK1EP49674 416 aaKnown RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 RRADP55042 308 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 FABP9Q0Z7S8 132 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 Q6ZRG5 221 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 SLC22A18ASQ8N1D0 253 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR5T2Q8NGG2 359 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR51T1Q8NGJ9 327 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR8B4Q96RC9 309 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 NAA11Q9BSU3 229 aaPredicted RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 SLC25A32Q9H2D1 315 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 TMED7-TICAM2A0A0A6YYA0 188 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 IGHV3-15A0A0B4J1V0 119 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 A0A1W2PPH5 198 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 PRAMEF26H0Y7S4 382 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 ZNF93P35789 620 aaPredicted RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 CBX5P45973 191 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 FLI1Q01543 452 aaPredicted RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 IKZF1Q13422 519 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 KIAA0895LQ68EN5 471 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 LYG2Q86SG7 212 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 MYPOPQ86VE0 399 aaPredicted RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 ARHGAP5-AS1Q96IT6 56 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR10C1Q96KK4 312 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 IGHV5-51A0A0C4DH38 117 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 SULT2B1O00204 365 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 RER1O15258 196 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR8U9P0C7N5 309 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 ANOS1P23352 680 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 C19orf47Q8N9M1 422 aaKnown RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 OR8U1Q8NH10 309 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 AKR7LQ8NHP1 331 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 SFT2D1Q8WV19 159 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
HOXC11-202ENST00000546378 C8orf44Q96CB5 159 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 WWTR1Q9GZV5 400 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 BIN3Q9NQY0 253 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 GLS2Q9UI32 602 aa13.07□□□□□ -0.32
HOXC11-202ENST00000546378 PLXNA2O75051 1894 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 H3BMH7 237 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
HOXC11-202ENST00000546378 AK1P00568 194 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 F10P00742 488 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
HOXC11-202ENST00000546378 IAH1Q2TAA2 248 aaPredicted RBP13.06□□□□□ -0.32
HOXC11-202ENST00000546378 SYT13Q7L8C5 426 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 LRP11Q86VZ4 500 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 WDFY1Q8IWB7 410 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 KLRF1Q9NZS2 232 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 H0YIZ8 118 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 FOXS1O43638 330 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 MEOX2P50222 304 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 MITD1Q8WV92 249 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
HOXC11-202ENST00000546378 GUCD1Q96NT3 240 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 RAB33BQ9H082 229 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 PIGMQ9H3S5 423 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 RGCCQ9H4X1 137 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 CHST11Q9NPF2 352 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 LANCL2Q9NS86 450 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 UQCC1Q9NVA1 299 aa13.06□□□□□ -0.32
HOXC11-202ENST00000546378 GDF2Q9UK05 429 aaPredicted RBP13.06□□□□□ -0.32
HOXC11-202ENST00000546378 A0A1W2PPE2 198 aa13.05□□□□□ -0.32
HOXC11-202ENST00000546378 MEX3AA1L020 520 aaKnown RBP13.05□□□□□ -0.32
HOXC11-202ENST00000546378 C9JQL5 133 aa13.05□□□□□ -0.32
HOXC11-202ENST00000546378 ARPC3O15145 178 aa13.05□□□□□ -0.32
HOXC11-202ENST00000546378 ABHD16AO95870 558 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms