RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 RESP18Q5W5W9 173 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 TTC19Q6DKK2 380 aaPredicted RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 SCD5Q86SK9 330 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 BBS7Q8IWZ6 715 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 C11orf53Q8IXP5 236 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 C12orf56Q8IXR9 622 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 TMEM86AQ8N2M4 240 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 ZADH2Q8N4Q0 377 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 C12orf29Q8N999 325 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 OR2L5Q8NG80 312 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 SLC7A13Q8TCU3 470 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 NDRG1Q92597 394 aaKnown RBP2.58□□□□□ -2
SCFD1-207ENST00000544052 RDH5Q92781 318 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 CCDC127Q96BQ5 260 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 PLGRKTQ9HBL7 147 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 CSNK1G1Q9HCP0 422 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 ANKRD36A6QL64 1941 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 LRP4O75096 1905 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 CACNA1GO43497 2377 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 ITPR1Q14643 2758 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 BPTFQ12830 3046 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 NBEAQ8NFP9 2946 aa2.58□□□□□ -2
SCFD1-207ENST00000544052 TRAV19A0A0A6YYK7 116 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ZNF233A6NK53 670 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 AIM2O14862 343 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SOX15O60248 233 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 KLF8O95600 359 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 YEATS4O95619 227 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 CISD3P0C7P0 127 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 FOLR1P15328 257 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 GABRG2P18507 467 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 CPN2P22792 545 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 CMA1P23946 247 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 CTRLP40313 264 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 NAA10P41227 235 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 SUB1P53999 127 aaKnown RBP eCLIP2.57□□□□□ -21e-7■■■■□ 20.1
SCFD1-207ENST00000544052 YWHAGP61981 247 aaKnown RBP eCLIP2.57□□□□□ -2
SCFD1-207ENST00000544052 RPL10AP62906 217 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 DAZ2Q13117 558 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 DNAJC3Q13217 504 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 STK38Q15208 465 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ZCWPW2Q504Y3 356 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 TMEM215Q68D42 235 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 REEP3Q6NUK4 255 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ACP7Q6ZNF0 438 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 CLEC20AQ6ZU45 233 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 TMEM25Q86YD3 366 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 KATNAL2Q8IYT4 538 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 DEFB119Q8N690 84 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 EID2Q8N6I1 236 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 DCAF4L2Q8NA75 395 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 OR11A1Q9GZK7 315 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SYNDIG1Q9H7V2 258 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 EML4Q9HC35 981 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 DAZ3Q9NR90 486 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 FAM49BQ9NUQ9 324 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 GTF3C1Q12789 2109 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ACACAQ13085 2346 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 DSPP15924 2871 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 ANKRD11Q6UB99 2663 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 IGHV1OR15-9A0A0B4J2B8 117 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ZNF726A6NNF4 738 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SUPT3HB4E1H0 165 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 C10orf142B7Z368 130 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 F6UB75 175 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 NVLO15381 856 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 OR2F2O95006 317 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ASS1P00966 412 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 CD9P21926 228 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 DCKP27707 260 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 GTF2E2P29084 291 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 RFX3P48380 749 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 CSNK1EP49674 416 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 INCA1Q0VD86 236 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 UNC119Q13432 240 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 VAX1Q5SQQ9 334 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 PIP5KL1Q5T9C9 394 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 OTPQ5XKR4 325 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SLC16A14Q7RTX9 510 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 LIX1Q8N485 282 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SUMF2Q8NBJ7 301 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 OR4C5Q8NGB2 326 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 LILRB4Q8NHJ6 448 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 PHYHIPLQ96FC7 376 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 DUS3LQ96G46 650 aaKnown RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 ANKRD36BP1Q96IX9 119 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 PRRC1Q96M27 445 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 ZNF578Q96N58 590 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 ZSCAN16Q9H4T2 348 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 CLMPQ9H6B4 373 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 HAUS4Q9H6D7 363 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 RANBP3Q9H6Z4 567 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 EXD2Q9NVH0 621 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 AHSPQ9NZD4 102 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 UXTQ9UBK9 157 aaPredicted RBP2.57□□□□□ -2
SCFD1-207ENST00000544052 TP53TG3Q9ULZ0 132 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SCN8AQ9UQD0 1980 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 SCN2AQ99250 2005 aa2.57□□□□□ -2
SCFD1-207ENST00000544052 BSNQ9UPA5 3926 aa2.56□□□□□ -2
SCFD1-207ENST00000544052 IGSF10Q6WRI0 2623 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms