RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 DLL1O00548 723 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ST8SIA3O43173 380 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 AREGP15514 252 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 PNLIPP16233 465 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 KITLGP21583 273 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 HNRNPFP52597 415 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ELFN2Q5R3F8 820 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 SFRP5Q5T4F7 317 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 RNASEKQ6P5S7 137 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 C16orf47Q6ZP98 133 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 MDGA2Q7Z553 956 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 MRGPREQ86SM8 312 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ZDHHC23Q8IYP9 409 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 C12orf45Q8N5I9 185 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 NOXO1Q8NFA2 376 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 OR10D3Q8NH80 312 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 REEP6Q96HR9 211 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 C20orf24Q9BUV8 137 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 POFUT1Q9H488 388 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 CGGBP1Q9UFW8 167 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ETV7Q9Y603 341 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 NCOR1O75376 2440 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 LOC100289279A0A1B0GTE1 492 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 I3L521 148 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SOD1P00441 154 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF728P0DKX0 622 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 HTR2AP28223 471 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 RPS27P42677 84 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SRPXP78539 464 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 PRICKLE4Q2TBC4 344 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 HIST2H3PS2Q5TEC6 136 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 MRM1Q6IN84 353 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 OR10X1Q8NGY0 326 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 HAS2Q92819 552 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 JAM3Q9BX67 310 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 KLK4Q9Y5K2 254 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TEX51A0A1B0GUA7 166 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TBX19O60806 448 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 IFNA10P01566 189 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 MT-ND4P03905 459 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 S100PP25815 95 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 S100A2P29034 98 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 RRAS2P62070 204 aaPredicted RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 UBE2IP63279 158 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 AQP6Q13520 282 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 EBPQ15125 230 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 DCAF10Q5QP82 559 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 ACSM5Q6NUN0 579 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 GTPBP8Q8N3Z3 284 aaPredicted RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 PLPP5Q8NEB5 264 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 RDH5Q92781 318 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SLAMF9Q96A28 289 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF48Q96MX3 618 aaPredicted RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 RASL10BQ96S79 203 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TXNL4BQ9NX01 149 aaKnown RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 GDF2Q9UK05 429 aaPredicted RBP6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TRIP11Q15643 1979 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TCAPO15273 167 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TFP02787 698 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SRMP19623 302 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 GIFP27352 417 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 OPRL1P41146 370 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 ETV6P41212 452 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 MESP2Q0VG99 397 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SLAQ13239 276 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 RNLSQ5VYX0 342 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 PAQR6Q6TCH4 344 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 APOOLQ6UXV4 268 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 IDO2Q6ZQW0 420 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 PTOV1Q86YD1 416 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 AMER3Q8N944 861 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 OR1M1Q8NGA1 313 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SCARB1Q8WTV0 552 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 TNFRSF14Q92956 283 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 BORCS7Q96B45 105 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 OR5M11Q96RB7 305 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SHARPINQ9H0F6 387 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 KIAA1456Q9P272 454 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 SLCO1B1Q9Y6L6 691 aa6.21□□□□□ -1.42
SRGAP1-206ENST00000543397 RAF1P04049 648 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 GP1BAP07359 652 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SMIM21Q3B7S5 101 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SPATA46Q5T0L3 261 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ETV3LQ6ZN32 361 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 CMTM4Q8IZR5 234 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 OR10J5Q8NHC4 309 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 DPCDQ9BVM2 203 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RAB33BQ9H082 229 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 BANF2Q9H503 90 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ZCCHC4Q9H5U6 513 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ZMAT3Q9HA38 289 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 KCNE3Q9Y6H6 103 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SIRPB1O00241 398 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ARPC5O15511 151 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SPRY3O43610 288 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC2A10O95528 541 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SCGB1D1O95968 90 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TNFSF8P32971 234 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 EGR3Q06889 387 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms