RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 EMP2P54851 167 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 EFNB1P98172 346 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 PMS2CLQ68D20 193 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 TMPRSS7Q7RTY8 843 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 WDR5BQ86VZ2 330 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 NANOS1Q8WY41 292 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 FGF11Q92914 225 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 MRGPRFQ96AM1 343 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 SLC41A2Q96JW4 573 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 VSTM2LQ96N03 204 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 DERL3Q96Q80 235 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 MRPL13Q9BYD1 178 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 CACYBPQ9HB71 228 aaKnown RBP7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 LANCL2Q9NS86 450 aa7.16□□□□□ -1.26
PDLIM5-221ENST00000542407 A0A0C4DFX4 3053 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 CPSF4LA6NMK7 179 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 PEX12O00623 359 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF749O43361 778 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 IGKV1D-16P01601 117 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF14P17017 642 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 MAOAP21397 527 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 HTR2AP28223 471 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 S100A2P29034 98 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 GCH1P30793 250 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 PYCR1P32322 319 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 EFNA3P52797 238 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 ISXQ2M1V0 245 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 ENTPD8Q5MY95 495 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 LANCL3Q6ZV70 420 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 MOB3CQ70IA8 216 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 LRRTM1Q86UE6 522 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 ANGPTL5Q86XS5 388 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 D2HGDHQ8N465 521 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 METTL27Q8N6F8 245 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 OR2AK2Q8NG84 335 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 OR4K15Q8NH41 348 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 C14orf79Q96F83 325 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 WDR13Q9H1Z4 485 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 SLCO5A1Q9H2Y9 848 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 CENPMQ9NSP4 180 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 ZNF230Q9UIE0 474 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 DMDP11532 3685 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 NUP210LQ5VU65 1888 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 SCN2AQ99250 2005 aa7.15□□□□□ -1.26
PDLIM5-221ENST00000542407 AP4M1O00189 453 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 MAGEB4O15481 346 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 ADAP1O75689 374 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 AK1P00568 194 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 EPXP11678 715 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 NID1P14543 1247 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 MGMTP16455 207 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 GSTM3P21266 225 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 TAS2R41P59536 307 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 PPIAP62937 165 aaKnown RBP7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 HSD11B2P80365 405 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 ZXDAP98168 799 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 TAF13Q15543 124 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 LYSMD4Q5XG99 296 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 UNQ6126/PRO20091Q6UXV3 157 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 MUC20Q8N307 709 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 LINC00471Q8N535 108 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 COX18Q8N8Q8 333 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 OR1L3Q8NH93 324 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 ACOT11Q8WXI4 607 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 GHSRQ92847 366 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 MMABQ96EY8 250 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF649Q9BS31 505 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 PCGF1Q9BSM1 259 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 HINT2Q9BX68 163 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 GPR87Q9BY21 358 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 LPAR2Q9HBW0 351 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 PRTFDC1Q9NRG1 225 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 PILRBQ9UKJ0 227 aa7.15□□□□□ -1.27
PDLIM5-221ENST00000542407 ELOA3CA0A087WX78 387 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NPIPA5A0A0B4J1W7 369 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CDHR4A6H8M9 788 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ELOA3DA6NLF2 546 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 A6NNC1 897 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 F5H0A9 414 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 DBIP07108 87 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ANXA2P07355 339 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 GABRA3P34903 492 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 IFNGR2P38484 337 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FUT7Q11130 342 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 PEAR1Q5VY43 1037 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FIGNL1Q6PIW4 674 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 WDR74Q6RFH5 385 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF620Q6ZNG0 422 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FCRLAQ7L513 359 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 GDF7Q7Z4P5 450 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF615Q8N8J6 731 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 OR4N2Q8NGD1 307 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MAFAQ8NHW3 353 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 BRIX1Q8TDN6 353 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 HAVCR2Q8TDQ0 301 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 C4orf36Q96KX1 117 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CNTNAP3BQ96NU0 1288 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 PRSS27Q9BQR3 290 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NDC1Q9BTX1 674 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms