RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MARC2Q969Z3 335 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 CMTM5Q96DZ9 223 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 ZNF385AQ96PM9 386 aaKnown RBP4.65□□□□□ -1.67
DDB1-219ENST00000541513 PEBP4Q96S96 227 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 MICU1Q9BPX6 476 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 CHRNA10Q9GZZ6 450 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 RETNQ9HD89 108 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 HEBP1Q9NRV9 189 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 DEC1Q9P2X7 70 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 OR12D3Q9UGF7 316 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 FBXL3Q9UKT7 428 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 NEU3Q9UQ49 428 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 ARL2BPQ9Y2Y0 163 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 MRPS18BQ9Y676 258 aaKnown RBP4.65□□□□□ -1.67
DDB1-219ENST00000541513 EML5Q05BV3 1969 aa4.65□□□□□ -1.67
DDB1-219ENST00000541513 PI4KAP42356 2102 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 CEP192Q8TEP8 1941 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 SDK1Q7Z5N4 2213 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 CXorf51AA0A1B0GTR3 108 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PSMB11A5LHX3 300 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAM231BA6NCW3 169 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 NEDD8-MDP1E9PL57 170 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAM72CH0Y354 149 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 hCG_2039718K7EN88 272 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ACOX3O15254 700 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 SIGLEC5O15389 551 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 MED6O75586 246 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 GATBO75879 557 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 TNFAIP8O95379 198 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 APODP05090 189 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 CISD3P0C7P0 127 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 C4BPBP20851 252 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 EDNRAP25101 427 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 MPIP34949 423 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PHBP35232 272 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 TALDO1P37837 337 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 MAGEA3P43357 314 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 RPS9P46781 194 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 OR3A2P47893 321 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 TFPI2P48307 235 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 AMTP48728 403 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 DAP3P51398 398 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 HILS1P60008 231 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 TPI1P60174 286 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 RPS14P62263 151 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 PSPHP78330 225 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 SLC35B1P78383 322 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ARL16Q0P5N6 197 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 AQP6Q13520 282 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 BSXQ3C1V8 233 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 CARD16Q5EG05 197 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAM72AQ5TYM5 149 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAM72DQ6L9T8 149 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 USP43Q70EL4 1123 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 AHSA2Q719I0 299 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 CMC1Q7Z7K0 106 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAM72BQ86X60 149 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 SLC22A15Q8IZD6 547 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 HS3ST5Q8IZT8 346 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ABHD12Q8N2K0 398 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 Q8N402 240 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PGBD5Q8N414 524 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 BPIFB2Q8N4F0 458 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 TMEM251Q8N6I4 163 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 SLC16A11Q8NCK7 471 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ZNF740Q8NDX6 193 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 LFNGQ8NES3 379 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 OR6K6Q8NGW6 343 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 WFDC5Q8TCV5 224 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ACTRT1Q8TDG2 376 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAM222BQ8WU58 562 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 DGCR14Q96DF8 476 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 PDXPQ96GD0 296 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ZNF285Q96NJ3 590 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 WFIKKN1Q96NZ8 548 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PRAP1Q96NZ9 151 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 RCHY1Q96PM5 261 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 LGMNQ99538 433 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 C12orf57Q99622 126 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 EBNA1BP2Q99848 306 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 OVOL2Q9BRP0 275 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 ZNF2Q9BSG1 426 aaPredicted RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 FAIM2Q9BWQ8 316 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 DHX35Q9H5Z1 703 aaKnown RBP4.64□□□□□ -1.67
DDB1-219ENST00000541513 REEP4Q9H6H4 257 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 EBF2Q9HAK2 575 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 C3orf14Q9HBI5 128 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PARD6AQ9NPB6 346 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 CLN6Q9NWW5 311 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 HRASLS2Q9NWW9 162 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 TFR2Q9UP52 801 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PPP1R3CQ9UQK1 317 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 TCF19Q9Y242 345 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 KCNIP3Q9Y2W7 256 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 PRELID3BQ9Y3B1 194 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 SNX10Q9Y5X0 201 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 NUBP2Q9Y5Y2 271 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 WDR87Q6ZQQ6 2873 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 NUMA1Q14980 2115 aa4.64□□□□□ -1.67
DDB1-219ENST00000541513 KNL1Q8NG31 2342 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms