RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DUX4L3P0CJ86 424 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUX4L4P0CJ87 422 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUX4L5P0CJ88 424 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUX4L6P0CJ89 424 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUX4L7P0CJ90 424 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 TPT1P13693 172 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 EN2P19622 333 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 FSTP19883 344 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CAPZBP47756 277 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM50BP56557 158 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CLDN6P56747 220 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 SNRPEP62304 92 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CTAG1AP78358 180 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 C1orf100Q5SVJ3 147 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 ABHD12BQ7Z5M8 362 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 NANPQ8TBE9 248 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC46A1Q96NT5 459 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 PBOV1Q9GZY1 135 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 METTL8Q9H825 291 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 CUTCQ9NTM9 273 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 COA4Q9NYJ1 87 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUX4Q9UBX2 424 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 COL4A2P08572 1712 aa9.19□□□□□ -0.94
CDC42SE1-207ENST00000540998 FRG2CA6NGY1 282 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RER1O15258 196 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 FGF16O43320 207 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAMP1O60894 148 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 MED6O75586 246 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 CFPP27918 469 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF93P35789 620 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 FHITP49789 147 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 MEF2DQ14814 521 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF704Q6ZNC4 412 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAB11FIP2Q7L804 512 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 EDAQ92838 391 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ARL11Q969Q4 196 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 BSCL2Q96G97 398 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 HDHD3Q9BSH5 251 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 WWTR1Q9GZV5 400 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 LPAR5Q9H1C0 372 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RHOFQ9HBH0 211 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 FAM206AQ9NX38 181 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 NDRG3Q9UGV2 375 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAB22AQ9UL26 194 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 POLR1DQ9Y2S0 133 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 IGKV1D-8A0A087WSZ0 117 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 A8MVM7 634 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 TSPAN2O60636 221 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 CRTAPO75718 401 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 PGCP20142 388 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RABIFP47224 123 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 DHPSP49366 369 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 HYAL1Q12794 435 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 SUSD2Q9UGT4 822 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 TEX13DA0A0J9YY54 714 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM127O75204 238 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 EIF3GO75821 320 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 SFTA3P0C7M3 94 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR8U9P0C7N5 309 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RD3LP0DJH9 198 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 CD79AP11912 226 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 PTGFRP43088 359 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 POLR2HP52434 150 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 F2RL1P55085 397 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 YPEL5P62699 121 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 TLE3Q04726 772 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 SSBP1Q04837 148 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 SRSF4Q08170 494 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 PPP1R3BQ86XI6 285 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 SEMA6DQ8NFY4 1073 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR13G1Q8NGZ3 307 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ASB10Q8WXI3 467 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 TCTN2Q96GX1 697 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 AKR1E2Q96JD6 320 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 CLCC1Q96S66 551 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 NRIP2Q9BQI9 281 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF304Q9HCX3 659 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 PDE7BQ9NP56 450 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 CD207Q9UJ71 328 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 PCDHGA1Q9Y5H4 931 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 KLF2Q9Y5W3 355 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 RFNGQ9Y644 331 aa9.18□□□□□ -0.94
CDC42SE1-207ENST00000540998 EML6Q6ZMW3 1958 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 LOC390937A0A1W2PQ73 354 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 DBX1A6NMT0 343 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF814B7Z6K7 855 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 ALG1L2C9J202 215 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 FTCDNL1E5RQL4 147 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 C1QL1O75973 258 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 HCKP08631 526 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 RFC3P40938 356 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 ASCL1P50553 236 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms