RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 LRRC42Q9Y546 428 aa15.02■□□□□ -0
CLSTN3-210ENST00000540931 RAI1Q7Z5J4 1906 aaPredicted RBP15.02□□□□□ -0.01
CLSTN3-210ENST00000540931 GGT3PA6NGU5 568 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 IQCF6A8MYZ5 107 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 PTGES3LE9PB15 166 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 J3QLW9 94 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 RGS10O43665 173 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 XPNPEP2O43895 674 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 CDK1P06493 297 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 SOD3P08294 240 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 ADH4P08319 380 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF19P17023 458 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 CRHBPP24387 322 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 MAP2K3P46734 347 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 SLC35A2P78381 396 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 PSG7Q13046 419 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 KRTAP21-3Q3LHN1 58 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 TMEM244Q5VVB8 128 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 C11orf71Q6IPW1 123 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF786Q8N393 782 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 OR8G5Q8NG78 346 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 OR13G1Q8NGZ3 307 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 IGFBPL1Q8WX77 278 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 C10orf35Q96D05 121 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 REEP6Q96HR9 211 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 SIGLEC11Q96RL6 698 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 MND1Q9BWT6 205 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 GSX2Q9BZM3 304 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 TRIM36Q9NQ86 728 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF701Q9NV72 531 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 PTTG3PQ9NZH4 202 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 MRPL15Q9P015 296 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 TAAR3PQ9P1P4 343 aa15.01□□□□□ -0.01
CLSTN3-210ENST00000540931 PSMD9O00233 223 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 LIMS3P0CW19 117 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 LIMS4P0CW20 117 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 EEF1B2P24534 225 aaKnown RBP15□□□□□ -0.01
CLSTN3-210ENST00000540931 BDH1Q02338 343 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 MST1LQ2TV78 715 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 SNAI3Q3KNW1 292 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 SPATA46Q5T0L3 261 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 LAIR2Q6ISS4 152 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 RPL22L1Q6P5R6 122 aaKnown RBP15□□□□□ -0.01
CLSTN3-210ENST00000540931 SSX6Q7RTT6 188 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 PRSS48Q7RTY5 328 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 NAA40Q86UY6 237 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 CATSPERDQ86XM0 798 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 SYT3Q9BQG1 590 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 EGLN1Q9GZT9 426 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 COMMD4Q9H0A8 199 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 BRD7Q9NPI1 651 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 BABAM2Q9NXR7 383 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 GTF2A1LQ9UNN4 478 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 N6AMT1Q9Y5N5 214 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 ROS1P08922 2347 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 DSCAMO60469 2012 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 RTTNQ86VV8 2226 aa15□□□□□ -0.01
CLSTN3-210ENST00000540931 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 TMEM212A6NML5 194 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 ANKRD30BLA7E2S9 258 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 GMDSO60547 372 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 SRSF10O75494 262 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 RPP14O95059 124 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 CD8AP01732 235 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 ISG15P05161 165 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 SLC2A1P11166 492 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF81P51508 661 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 WNT4P56705 351 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 OR12D2P58182 307 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 ERVS71-1P61550 626 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 DEFB113Q30KQ7 82 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 TP53I3Q53FA7 332 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 GLYATL3Q5SZD4 288 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 DOK3Q7L591 496 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 COMMD2Q86X83 199 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 SVOPQ8N4V2 548 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 OR8B12Q8NGG6 310 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 THRSPQ92748 146 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 RORBQ92753 470 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 SGK3Q96BR1 496 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 PELI1Q96FA3 418 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 CACNG6Q9BXT2 260 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 ACOXLQ9NUZ1 547 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 TMEM100Q9NV29 134 aa14.99□□□□□ -0.01
CLSTN3-210ENST00000540931 A0A1B0GVI7 797 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 CD300LBA8K4G0 201 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 C17orf100A8MU93 164 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 DHRS3O75911 302 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 CSF3P09919 207 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 TNFRSF1AP19438 455 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 DSCR9P59020 149 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 KRTAP10-9P60411 292 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 MRPS11P82912 194 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 ZNF92Q03936 586 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 ALKBH1Q13686 389 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 OR8B8Q15620 311 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 PRSS57Q6UWY2 283 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 SPNS3Q6ZMD2 512 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 RFLNBQ8N5W9 214 aa14.98□□□□□ -0.01
CLSTN3-210ENST00000540931 NANOGP1Q8N7R0 232 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms