RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 LOC100289279A0A1B0GTE1 492 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ISPDA4D126 451 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 A8MV72 311 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 PRR32B1ATL7 298 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF670-ZNF695F2Z2N8 137 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 LCE2BO14633 110 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 MAGEB4O15481 346 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 TGFAP01135 160 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 SBK2P0C263 348 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ANPEPP15144 967 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 CFL1P23528 166 aaKnown RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ATP6V1E1P36543 226 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 SRP9P49458 86 aaKnown RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 PSMA6P60900 246 aaKnown RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 CXCR4P61073 352 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ROM1Q03395 351 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 GABPB1Q06547 395 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 POU4F2Q12837 409 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 RCN1Q15293 331 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 OR8G1Q15617 311 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 DEGS2Q6QHC5 323 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF322Q6U7Q0 402 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF771Q7L3S4 317 aaPredicted RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF679Q8IYX0 411 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 TRUB1Q8WWH5 349 aaKnown RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 HPS1Q92902 700 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 RFKQ969G6 155 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 SPSB4Q96A44 273 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 OR8B4Q96RC9 309 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 MNTQ99583 582 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 TBX5Q99593 518 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 SLC22A4Q9H015 551 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 GCM1Q9NP62 436 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 CLN6Q9NWW5 311 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 HAO2Q9NYQ3 351 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 MRPL15Q9P015 296 aaKnown RBP7.8□□□□□ -1.16
SNHG1-215ENST00000540904 GMPPBQ9Y5P6 360 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 CSPG4Q6UVK1 2322 aa7.8□□□□□ -1.16
SNHG1-215ENST00000540904 hCG_38984A0A1B0GV85 526 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 TMEM269A0A1B0GVZ9 245 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 A0A1B0GWJ7 208 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 A0A1W2PQL4 384 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 ANKRD30BLA7E2S9 258 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 PHYHO14832 338 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 GMDSO60547 372 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 ENTPD6O75354 484 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF254O75437 659 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 HOXB4P17483 251 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 DDOSTP39656 456 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 GSK3AP49840 483 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 MMP16P51512 607 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 RIDAP52758 137 aaKnown RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 SNRPGP62308 76 aaKnown RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 FAM3AP98173 230 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 MAB21L1Q13394 359 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF829Q3KNS6 432 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 FAM166AQ6J272 317 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 MOGAT3Q86VF5 341 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 GALNT4Q8N4A0 578 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 LINC01356Q8N9X3 169 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 OR10H4Q8NGA5 316 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 OR8B12Q8NGG6 310 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF420Q8TAQ5 688 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 DVL3Q92997 716 aaPredicted RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 GAL3ST1Q99999 423 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 APOL4Q9BPW4 351 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 ADAT1Q9BUB4 502 aaKnown RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 RGCCQ9H4X1 137 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 LPAR2Q9HBW0 351 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 FAM206AQ9NX38 181 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 UBAP1Q9NZ09 502 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 GTF2A1LQ9UNN4 478 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 NOP16Q9Y3C1 178 aaKnown RBP7.79□□□□□ -1.16
SNHG1-215ENST00000540904 NPTNQ9Y639 398 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 CR1P17927 2039 aa7.79□□□□□ -1.16
SNHG1-215ENST00000540904 LOC100130705A0A1B0GUX0 176 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 ERICH4A6NGS2 130 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 ACOD1A6NK06 481 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 LRRC30A6NM36 301 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 B4DSR2 109 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 FAM157AC9JC47 383 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 E9PQ18 207 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 TMEM178BH3BS89 294 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 LMX1BO60663 402 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF205O95201 554 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 CYB5R3P00387 301 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-215ENST00000540904 GRPP07492 148 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 OR2T7P0C7T2 308 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 DCTDP32321 178 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 MTNR1AP48039 350 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 CDH15P55291 814 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 LMO4P61968 165 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 EGR3Q06889 387 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 MFGE8Q08431 387 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-215ENST00000540904 TMED1Q13445 227 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 MPPED2Q15777 294 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 PRAMEF6Q5VXH4 476 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 LPCAT4Q643R3 524 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 PLEKHG7Q6ZR37 379 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 SSX6Q7RTT6 188 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms