RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 GATA4P43694 442 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 MVKQ03426 396 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 ZNF181Q2M3W8 571 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 SPRNQ5BIV9 151 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 LRRN1Q6UXK5 716 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 FAM57BQ71RH2 274 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 BCDIN3DQ7Z5W3 292 aaKnown RBP11.32□□□□□ -0.6
CCDC130-202ENST00000540216 OR56B2PQ8NGI1 322 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 FAM81AQ8TBF8 368 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 ITFG2Q969R8 447 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 ERGIC1Q969X5 290 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 EME1Q96AY2 570 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 REEP6Q96HR9 211 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 OR8B4Q96RC9 309 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 NARFLQ9H6Q4 476 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 GCM1Q9NP62 436 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 DNAJC27Q9NZQ0 273 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 N6AMT1Q9Y5N5 214 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 NPTNQ9Y639 398 aa11.32□□□□□ -0.6
CCDC130-202ENST00000540216 hCG_38984A0A1B0GV85 526 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 F5H5P2 479 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 H0YL77 283 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 WNT9BO14905 357 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 TGFAP01135 160 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ANPEPP15144 967 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ANOS1P23352 680 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 CD200P41217 278 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 MMP16P51512 607 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 PRSS12P56730 875 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 LMO4P61968 165 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 FAM3AP98173 230 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 OR8G1Q15617 311 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ZSCAN26Q16670 478 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ZNF829Q3KNS6 432 aaPredicted RBP11.31□□□□□ -0.6
CCDC130-202ENST00000540216 KRTAP21-3Q3LHN1 58 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 SLC25A30Q5SVS4 291 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ZBTB49Q6ZSB9 765 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ZNF679Q8IYX0 411 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 FTMTQ8N4E7 242 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 SPERTQ8NA61 448 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 SGK3Q96BR1 496 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 PGAM5Q96HS1 289 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 SOX7Q9BT81 388 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ADAT1Q9BUB4 502 aaKnown RBP11.31□□□□□ -0.6
CCDC130-202ENST00000540216 CLN6Q9NWW5 311 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 TREM2Q9NZC2 230 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 ABCA2Q9BZC7 2435 aa11.31□□□□□ -0.6
CCDC130-202ENST00000540216 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 ISPDA4D126 451 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 LRRC30A6NM36 301 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 E9PQ18 207 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 ZNF670-ZNF695F2Z2N8 137 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 FSTL3O95633 263 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 PTBP3O95758 552 aaKnown RBP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 IGHV2-70P01814 119 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 IGHV2-5P01817 119 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 SBK2P0C263 348 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 CA6P23280 308 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 RIDAP52758 137 aaKnown RBP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 HCCSP53701 268 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 DVL1P1P54792 670 aaPredicted RBP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 CXCR4P61073 352 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 SNRPGP62308 76 aaKnown RBP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 BTG1P62324 171 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 EGR3Q06889 387 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 OR8B8Q15620 311 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 CHRFAM7AQ494W8 412 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 TMEM155Q4W5P6 130 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 MEDAGQ5VYS4 303 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 ZNF322Q6U7Q0 402 aaPredicted RBP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 C1orf87Q8N0U7 546 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 SPICQ8N5J4 248 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 CSNK2A3Q8NEV1 391 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 OR8B12Q8NGG6 310 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 OR51G2Q8NGK0 314 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 RDH12Q96NR8 316 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 GAL3ST1Q99999 423 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 BRD7Q9NPI1 651 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 FAM206AQ9NX38 181 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 IKZF2Q9UKS7 526 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC130-202ENST00000540216 COPS3Q9UNS2 423 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 DYSFO75923 2080 aa11.3□□□□□ -0.6
CCDC130-202ENST00000540216 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
CCDC130-202ENST00000540216 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
CCDC130-202ENST00000540216 SNTNA6NMZ2 147 aa11.29□□□□□ -0.6
CCDC130-202ENST00000540216 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
CCDC130-202ENST00000540216 BAG2O95816 211 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms