RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 BVESQ8NE79 360 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 NFAM1Q8NET5 270 aaPredicted RBP12.08□□□□□ -0.48
BNIP3-202ENST00000540159 AQP3Q92482 292 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 PPA2Q9H2U2 334 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 RAB22AQ9UL26 194 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 RNF222A6NCQ9 220 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 SULT2B1O00204 365 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 CDK2AP1O14519 115 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 FAHP16930 419 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 FSTP19883 344 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 ZP3P21754 424 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 MMP16P51512 607 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 GABREP78334 506 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 SLC51BQ86UW2 128 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 PXT1Q8NFP0 134 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 DCUN1D4Q92564 292 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
BNIP3-202ENST00000540159 RBM24Q9BX46 236 aaKnown RBP12.08□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF701Q9NV72 531 aaPredicted RBP12.08□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF581Q9P0T4 197 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 SHANK1Q9Y566 2161 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF407Q9C0G0 2248 aa12.08□□□□□ -0.48
BNIP3-202ENST00000540159 A0A1B0GTI1 187 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF726A6NNF4 738 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PDCD1Q15116 288 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 RAET1LQ5VY80 246 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 JMJD6Q6NYC1 403 aaPredicted RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 TMEM88Q6PEY1 159 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PLPP5Q8NEB5 264 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 OR10R2Q8NGX6 335 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ST8SIA1Q92185 356 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 RAB3CQ96E17 227 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF416Q9BWM5 594 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 CSAG2Q9Y5P2 127 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 WIF1Q9Y5W5 379 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 FREM1Q5H8C1 2179 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 IGHG1P01857 330 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 SCAND1P57086 179 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 DCDP81605 110 aaKnown RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PLXDC2Q6UX71 529 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ELP5Q8TE02 316 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PAQR8Q8TEZ7 354 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 RASL10BQ96S79 203 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 RARRES3Q9UL19 164 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PRELID1Q9Y255 219 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 RHBDD3Q9Y3P4 386 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 LAMA5O15230 3695 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 HSPB2A8KAH6 182 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 D6RAR5 112 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 STMND1H3BQB6 276 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 HOXB5P09067 269 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 RPA2P15927 270 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 M6PRP20645 277 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ZBTB25P24278 435 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 HSPB2Q16082 182 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 C1orf100Q5SVJ3 147 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 CPEB2Q7Z5Q1 589 aaKnown RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 TDHQ8IZJ6 230 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 OR2AE1Q8NHA4 323 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 FBXW5Q969U6 566 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF385AQ96PM9 386 aaKnown RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PHB2Q99623 299 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 PRRT1Q99946 306 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 TMEM59Q9BXS4 323 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 LPAR5Q9H1C0 372 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 UBE2ZQ9H832 354 aaPredicted RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 SLC17A5Q9NRA2 495 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 ALKBH4Q9NXW9 302 aa12.07□□□□□ -0.48
BNIP3-202ENST00000540159 GPN3Q9UHW5 284 aaPredicted RBP12.07□□□□□ -0.48
BNIP3-202ENST00000540159 OR6C65A6NJZ3 312 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 OR6C76A6NM76 312 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF878C9JN71 531 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 ATP6V1G2-DDX39BF2Z307 99 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 TRAF3IP2O43734 574 aaPredicted RBP12.06□□□□□ -0.48
BNIP3-202ENST00000540159 IGHMP01871 453 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 PGA4P0DJD7 388 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 PGA3P0DJD8 388 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 GABRR1P24046 479 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 TMEM50BP56557 158 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 SHBQ15464 509 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 PHYHD1Q5SRE7 291 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 OR2W3Q7Z3T1 314 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 C20orf196Q8IYI0 205 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 NKAIN3Q8N8D7 197 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 NOXO1Q8NFA2 376 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 THAP6Q8TBB0 222 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 THRSPQ92748 146 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 CCDC74BQ96LY2 380 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 ZNF768Q9H5H4 540 aaKnown RBP12.06□□□□□ -0.48
BNIP3-202ENST00000540159 B3GALT5Q9Y2C3 310 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 A0A1B0GTQ1 180 aa12.06□□□□□ -0.48
BNIP3-202ENST00000540159 FAM221AA4D161 298 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms