RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 RPL36Q9Y3U8 105 aaKnown RBP18.75■□□□□ 0.59
TRIM65-202ENST00000540128 CSPG4Q6UVK1 2322 aa18.75■□□□□ 0.59
TRIM65-202ENST00000540128 MAGEB4O15481 346 aaPredicted RBP18.74■□□□□ 0.59
TRIM65-202ENST00000540128 RP2O75695 350 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 DBTP11182 482 aaKnown RBP18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ACHEP22303 614 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ACTC1P68032 377 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ACTA1P68133 377 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 FAM3AP98173 230 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 IL5RAQ01344 420 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ZNF85Q03923 595 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 TIGD6Q17RP2 521 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ZNF829Q3KNS6 432 aaPredicted RBP18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ZNF540Q8NDQ6 660 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 SPRYD4Q8WW59 207 aaPredicted RBP18.74■□□□□ 0.59
TRIM65-202ENST00000540128 YIPF5Q969M3 257 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 ELMOD3Q96FG2 381 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 REEP6Q96HR9 211 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 TBX5Q99593 518 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 CHODLQ9H9P2 273 aa18.74■□□□□ 0.59
TRIM65-202ENST00000540128 A0A0U1RQV5 110 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 hCG_38984A0A1B0GV85 526 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 GGT3PA6NGU5 568 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 METTL15A6NJ78 407 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 PNPP00491 289 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 KRT8P05787 483 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 TNFSF4P23510 183 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 PRSS12P56730 875 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 TMEM33P57088 247 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 TNFAIP6P98066 277 aaPredicted RBP18.73■□□□□ 0.59
TRIM65-202ENST00000540128 RAB40BQ12829 278 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 EGFL6Q8IUX8 553 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 ACBD7Q8N6N7 88 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 OR2Z1Q8NG97 314 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 OR8B12Q8NGG6 310 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 TTTY10Q9BZA0 68 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 SLC22A4Q9H015 551 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 SAP30LQ9HAJ7 183 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 AMBNQ9NP70 447 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 MRPL15Q9P015 296 aaKnown RBP18.73■□□□□ 0.59
TRIM65-202ENST00000540128 IL19Q9UHD0 177 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 NUFIP1Q9UHK0 495 aaKnown RBP18.73■□□□□ 0.59
TRIM65-202ENST00000540128 R4GMQ9 66 aa18.73■□□□□ 0.59
TRIM65-202ENST00000540128 TEP1Q99973 2627 aaKnown RBP18.73■□□□□ 0.59
TRIM65-202ENST00000540128 RNF223E7ERA6 249 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 LYNX1G3V0Z9 82 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 LYNX1P0DP58 116 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 NR4A2P43354 598 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 SPRNQ5BIV9 151 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 PLEKHG7Q6ZR37 379 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 KCTD20Q7Z5Y7 419 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 BHLHE23Q8NDY6 225 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 FBLIM1Q8WUP2 373 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 PIMREGQ9BSJ6 248 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 PBOV1Q9GZY1 135 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 MTORP42345 2549 aa18.72■□□□□ 0.59
TRIM65-202ENST00000540128 IGHV1-69-2A0A0G2JMI3 117 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 MLNRO43193 412 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 FADS2O95864 444 aaKnown RBP18.71■□□□□ 0.59
TRIM65-202ENST00000540128 IGLV3-1P01715 115 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 GNAO1P09471 354 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 INHBBP09529 407 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 GSK3AP49840 483 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 LOXL1Q08397 574 aaPredicted RBP18.71■□□□□ 0.59
TRIM65-202ENST00000540128 MFGE8Q08431 387 aaPredicted RBP18.71■□□□□ 0.59
TRIM65-202ENST00000540128 OR8B8Q15620 311 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 CARTPTQ16568 116 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 SMN1Q16637 294 aaKnown RBP18.71■□□□□ 0.59
TRIM65-202ENST00000540128 KLHL22Q53GT1 634 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 KRT74Q7RTS7 529 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 KLBQ86Z14 1044 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 OR56B2PQ8NGI1 322 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 CNIH3Q8TBE1 160 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 LYZL4Q96KX0 146 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 SIGLEC11Q96RL6 698 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 MOB1AQ9H8S9 216 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 G6PC2Q9NQR9 355 aa18.71■□□□□ 0.59
TRIM65-202ENST00000540128 DAPL1A0PJW8 107 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 H0YL77 283 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 TPD52L2O43399 206 aaKnown RBP18.7■□□□□ 0.58
TRIM65-202ENST00000540128 ATP6V1G2O95670 118 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 IGHA1P01876 353 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 TNFRSF1AP19438 455 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 CDONQ4KMG0 1287 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 LIPNQ5VXI9 398 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 ELMOD2Q8IZ81 293 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 C8orf59Q8N0T1 100 aaPredicted RBP18.7■□□□□ 0.58
TRIM65-202ENST00000540128 CELF2-AS1Q8N7Q2 184 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 YIPF7Q8N8F6 280 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 ZNF649Q9BS31 505 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 JAM3Q9BX67 310 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 VCX3BQ9H321 246 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 FGF20Q9NP95 211 aaPredicted RBP18.7■□□□□ 0.58
TRIM65-202ENST00000540128 INPP5EQ9NRR6 644 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 ZNF275Q9NSD4 429 aaPredicted RBP18.7■□□□□ 0.58
TRIM65-202ENST00000540128 MYRFQ9Y2G1 1151 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 NOP16Q9Y3C1 178 aaKnown RBP18.7■□□□□ 0.58
TRIM65-202ENST00000540128 SNX5Q9Y5X3 404 aa18.7■□□□□ 0.58
TRIM65-202ENST00000540128 LOC110117498-PIK3R3F6TDL0 507 aa18.69■□□□□ 0.58
TRIM65-202ENST00000540128 GMDSO60547 372 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms