RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 NUP50Q9UKX7 468 aa15.94■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ARRDC5A6NEK1 342 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 AQP12BA6NM10 295 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ANXA2P07355 339 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 CD80P33681 288 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 BLVRAP53004 296 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GRB2P62993 217 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PAX8Q06710 450 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 LYPD2Q6UXB3 125 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 NLRC3Q7RTR2 1065 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 AQP12AQ8IXF9 295 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 HS3ST5Q8IZT8 346 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SIGLECL1Q8N7X8 197 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ZDHHC22Q8N966 263 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ERGIC1Q969X5 290 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PLEKHA8Q96JA3 519 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 OR51V1Q9H2C8 321 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 FN3KRPQ9HA64 309 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 MRPL15Q9P015 296 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ZNF69Q9UC07 566 aa15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 NOP16Q9Y3C1 178 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-212ENST00000539372 IGHV3OR16-10A0A075B7F0 116 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GYG2O15488 501 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GMDSO60547 372 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 E2F6O75461 281 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 FSTL3O95633 263 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 CPT2P23786 658 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 HSD11B1P28845 292 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SLC15A1P46059 708 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PITPNBP48739 271 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PAX2Q02962 417 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GINS1Q14691 196 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SFRP4Q6FHJ7 346 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 BTNL3Q6UXE8 466 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SPATA24Q86W54 205 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 BCL6BQ8N143 479 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GCDHQ92947 438 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 AMELYQ99218 206 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ABHD6Q9BV23 337 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 DNAJC27Q9NZQ0 273 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 RNF7Q9UBF6 113 aa15.92■□□□□ 0.14
TNFRSF1A-212ENST00000539372 IGHV2-70DA0A0C4DH43 119 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 XRCC2O43543 280 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GLCEO94923 617 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GRPP07492 148 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PAICSP22234 425 aaKnown RBP15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PRKACGP22612 351 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 FLOT2Q14254 428 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PLBD1Q6P4A8 553 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 LRRN1Q6UXK5 716 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 DCDC5Q6ZRR9 648 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 FAM57BQ71RH2 274 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 BCAS4Q8TDM0 211 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 RAB40AQ8WXH6 277 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SPSB4Q96A44 273 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ZMYND19Q96E35 227 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 MMADHCQ9H3L0 296 aaPredicted RBP15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 OPA3Q9H6K4 179 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 NTN4Q9HB63 628 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 C1orf123Q9NWV4 160 aa15.91■□□□□ 0.14
TNFRSF1A-212ENST00000539372 A6NLC8 198 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 C3orf80F5H4A9 247 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 PTBP3O95758 552 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 IGHV4-38-2P0DP08 117 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 CFPP27918 469 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ZNF121P58317 390 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 UBA52P62987 128 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 TIGD6Q17RP2 521 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 GFOD2Q3B7J2 385 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 DNAL1Q4LDG9 190 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 RBMS3Q6XE24 437 aaKnown RBP15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ZNF826PQ6ZT77 177 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SLC16A9Q7RTY1 509 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 TIGD4Q8IY51 512 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 RNF133Q8WVZ7 376 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 SGK3Q96BR1 496 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 REEP6Q96HR9 211 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 DUX5Q96PT3 197 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 TOR3AQ9H497 397 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 MARCH7Q9H992 704 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ZNF556Q9HAH1 456 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 BRD7Q9NPI1 651 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 CLN8Q9UBY8 286 aa15.9■□□□□ 0.14
TNFRSF1A-212ENST00000539372 ANKRD30BLA7E2S9 258 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 PRR23D1E9PI22 279 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 SELENOFO60613 162 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 FKBP6O75344 327 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 PRR23D2P0DMB1 279 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 OSMP13725 252 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 OPRL1P41146 370 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 CBX1P83916 185 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 FAM3AP98173 230 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 OR8B8Q15620 311 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 KLHL12Q53G59 568 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 WDR25Q64LD2 544 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 ZNF841Q6ZN19 808 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 SHFQ7M4L6 423 aa15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 DACT3Q96B18 629 aaPredicted RBP15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 NUDT16L1Q9BRJ7 211 aaKnown RBP15.89■□□□□ 0.13
TNFRSF1A-212ENST00000539372 ZNF319Q9P2F9 582 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms