RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 A0A1W2PR80 420 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CLEC18AA5D8T8 446 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CYSRT1A8MQ03 144 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 J3QRK9 145 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 ICMTO60725 284 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 RAF1P04049 648 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 LCATP04180 440 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 ANXA2P07355 339 aaKnown RBP8.88□□□□□ -0.99
CLPB-210ENST00000539148 CECR9P0C854 216 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 PATE4P0C8F1 98 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 UBCP0CG48 685 aaKnown RBP8.88□□□□□ -0.99
CLPB-210ENST00000539148 COX6B1P14854 86 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CD40P25942 277 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CCKARP32238 428 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 OTX1P32242 354 aaPredicted RBP8.88□□□□□ -0.99
CLPB-210ENST00000539148 TALDO1P37837 337 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 RPS27P42677 84 aaKnown RBP8.88□□□□□ -0.99
CLPB-210ENST00000539148 CX3CR1P49238 355 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CCR9P51686 369 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 SCAND1P57086 179 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 RPS25P62851 125 aaKnown RBP8.88□□□□□ -0.99
CLPB-210ENST00000539148 NAAAQ02083 359 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 ZNF85Q03923 595 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 BCL2L15Q5TBC7 163 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 LIPNQ5VXI9 398 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CLEC18BQ6UXF7 455 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 SPATC1Q76KD6 591 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 CLEC18CQ8NCF0 446 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 ABHD4Q8TB40 342 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 C15orf40Q8WUR7 153 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 AKAP1Q92667 903 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLPB-210ENST00000539148 HTRA1Q92743 480 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 PGAM5Q96HS1 289 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 POM121L2Q96KW2 1035 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 C4orf45Q96LM5 186 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 SLITRK2Q9H156 845 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 SLCO1C1Q9NYB5 712 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 ABRACLQ9P1F3 81 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 EDARQ9UNE0 448 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 GTF2A1LQ9UNN4 478 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 R4GMQ9 66 aa8.88□□□□□ -0.99
CLPB-210ENST00000539148 IGHV1-18A0A0C4DH31 117 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 FABP12A6NFH5 140 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 TMEM212A6NML5 194 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 SC5DO75845 299 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 ACSM4P0C7M7 580 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 SELEP16581 610 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 IGFBP2P18065 325 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 PRKXP51817 358 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 HCCSP53701 268 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 HNRNPA0Q13151 305 aaKnown RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 DAZAP2Q15038 168 aaPredicted RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 CDK5R1Q15078 307 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 ZNF718Q3SXZ3 478 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 TP53I3Q53FA7 332 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 NCMAPQ5T1S8 102 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 TMEM244Q5VVB8 128 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 FDX2Q6P4F2 183 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 SLC22A25Q6T423 547 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 LRRC28Q86X40 367 aaPredicted RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 PIAS4Q8N2W9 510 aaPredicted RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 CPEB3Q8NE35 698 aaKnown RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 FGFBP3Q8TAT2 258 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 LINC01560Q8TB33 94 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 RPS4Y2Q8TD47 263 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 TMEM203Q969S6 136 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 ITPKCQ96DU7 683 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 TMED9Q9BVK6 235 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 C1QTNF6Q9BXI9 259 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 C1QTNF5Q9BXJ0 243 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 NEK6Q9HC98 313 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 PNRC2Q9NPJ4 139 aaKnown RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 NPDC1Q9NQX5 325 aaPredicted RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 ETAA1Q9NY74 926 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 PLEKHB1Q9UF11 243 aaPredicted RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 COPS3Q9UNS2 423 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 NOP16Q9Y3C1 178 aaKnown RBP8.87□□□□□ -0.99
CLPB-210ENST00000539148 RNF115Q9Y4L5 304 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
CLPB-210ENST00000539148 IGHV2OR16-5A0A0B4J2B6 119 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 TRBV2A0A0J9YWF9 115 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 A0A0U1RQV5 110 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 ABCD4O14678 606 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 TBX1O43435 398 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 RPP14O95059 124 aaKnown RBP8.86□□□□□ -0.99
CLPB-210ENST00000539148 GCH1P30793 250 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 DDOSTP39656 456 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 NR4A2P43354 598 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 CAPZA1P52907 286 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 UCP2P55851 309 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 OR12D2P58182 307 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 PITPNAQ00169 270 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 BSPH1Q075Z2 132 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 ACSM3Q53FZ2 586 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 ZMAT1Q5H9K5 638 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 ZNF684Q5T5D7 378 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 MRPL21Q7Z2W9 205 aaKnown RBP8.86□□□□□ -0.99
CLPB-210ENST00000539148 CEACAM19Q7Z692 300 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 ZNF554Q86TJ5 538 aa8.86□□□□□ -0.99
CLPB-210ENST00000539148 COMMD2Q86X83 199 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms