RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF529Q6P280 563 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 CORO6Q6QEF8 472 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SLC25A42Q86VD7 318 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 FJX1Q86VR8 437 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 ZDHHC22Q8N966 263 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 OR1M1Q8NGA1 313 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 OR5D14Q8NGL3 314 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 LINC00052Q96N35 136 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 MRPL13Q9BYD1 178 aaKnown RBP12.9□□□□□ -0.34
CDCA3-207ENST00000538862 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SLC25A32Q9H2D1 315 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 ADAMTS20P59510 1910 aa12.9□□□□□ -0.34
CDCA3-207ENST00000538862 LOC101059948A0A1B0GTJ6 334 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 WIPF3A6NGB9 483 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 OR5H14A6NHG9 310 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 BET1O15155 118 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 HEXBP07686 556 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 UBBP0CG47 229 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 LAP3P28838 519 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 BIDP55957 195 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.35
CDCA3-207ENST00000538862 UBA52P62987 128 aaKnown RBP12.9□□□□□ -0.35
CDCA3-207ENST00000538862 FOXF1Q12946 379 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF345Q14585 488 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 CDNFQ49AH0 187 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 ADPRHL1Q8NDY3 354 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 ZBTB8AQ96BR9 441 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 SLC5A6Q9Y289 635 aa12.9□□□□□ -0.35
CDCA3-207ENST00000538862 A0A1B0GW55 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 A0A1W2PNU3 283 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 NTN3O00634 580 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 EIF1AYO14602 144 aaKnown RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 OR2F2O95006 317 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 IL2RAP01589 272 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 ERCC1P07992 297 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 TBPP20226 339 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 RAB3AP20336 220 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 ZBTB25P24278 435 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 GNALP38405 381 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 CXADRP78310 365 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 UNC119Q13432 240 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 OR2F1Q13607 317 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 FAHD2BQ6P2I3 314 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 RHOUQ7L0Q8 258 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 TMPRSS9Q7Z410 1059 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 LYG2Q86SG7 212 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 OR4S1Q8NGB4 309 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 OR52N4Q8NGI2 321 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 OR5L2Q8NGL0 311 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 OR1S1Q8NH92 325 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 THAP3Q8WTV1 239 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 ADAT3Q96EY9 351 aaPredicted RBP12.89□□□□□ -0.35
CDCA3-207ENST00000538862 FAHD2AQ96GK7 314 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 NUDT22Q9BRQ3 303 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 SHARPINQ9H0F6 387 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 MOB1AQ9H8S9 216 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 SDHAF3Q9NRP4 125 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 B3GAT1Q9P2W7 334 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 GLS2Q9UI32 602 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 VSIG4Q9Y279 399 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 PLEKHA6Q9Y2H5 1048 aa12.89□□□□□ -0.35
CDCA3-207ENST00000538862 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 POM121CA8CG34 1229 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 D6RAR5 112 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 EFNA2O43921 213 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF41P51814 821 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TUSC1Q2TAM9 212 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 KCNRGQ8N5I3 272 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 BVESQ8NE79 360 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 OR10S1Q8NGN2 331 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 NKD1Q969G9 470 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 PMEPA1Q969W9 287 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 COMMD9Q9P000 198 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 FBXL2Q9UKC9 423 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 NOP16Q9Y3C1 178 aaKnown RBP12.88□□□□□ -0.35
CDCA3-207ENST00000538862 TRBV11-1A0A0K0K1C0 115 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 H3BML4 177 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 HPP00738 406 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 VSIG8P0DPA2 414 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 ACY1Q03154 408 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 HYAL4Q2M3T9 481 aa12.88□□□□□ -0.35
CDCA3-207ENST00000538862 NKAIN1Q4KMZ8 207 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms