RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 DUSP5Q16690 384 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 OR52B4Q8NGK2 314 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 RTN4IP1Q8WWV3 396 aaPredicted RBP6.28□□□□□ -1.4
SORT1-209ENST00000538502 GINS3Q9BRX5 216 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 PLA2G12AQ9BZM1 189 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 STARD5Q9NSY2 213 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 PITPNC1Q9UKF7 332 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 SERTM2A0A1B0GWG4 89 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 ATF1P18846 271 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 P2RY1P47900 373 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 CDONQ4KMG0 1287 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 TCTN3Q6NUS6 607 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 PAQR9Q6ZVX9 377 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 PP6455Q8WZ26 134 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 MS4A6EQ96DS6 147 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 ABCD4O14678 606 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 TOX3O15405 576 aaPredicted RBP6.28□□□□□ -1.4
SORT1-209ENST00000538502 YIF1AO95070 293 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 SPCS3P61009 180 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 HTRA3P83110 453 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 SLC39A11Q8N1S5 342 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 OR5M1Q8NGP8 315 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 DPF1Q92782 380 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 CTSFQ9UBX1 484 aa6.28□□□□□ -1.4
SORT1-209ENST00000538502 SLC25A4P12235 298 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 AMTP48728 403 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 GPM6AP51674 278 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 FZD2Q14332 565 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ELAVL1Q15717 326 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 TRMT12Q53H54 448 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 LAIR1Q6GTX8 287 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 OR51F2Q8NH61 342 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 NPAS1Q99742 590 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 LSM2Q9Y333 95 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 M0R1X1 148 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 RPS23P62266 143 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 INPP5JQ15735 1006 aaPredicted RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 ZNF343Q6P1L6 599 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 UBE3DQ7Z6J8 389 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 RBM45Q8IUH3 476 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 CPEB3Q8NE35 698 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 OR51E1Q8TCB6 317 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 KCNE4Q8WWG9 221 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 PACRGQ96M98 296 aaPredicted RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 LINC00052Q96N35 136 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 KIF13AQ9H1H9 1805 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 CLEC18AA5D8T8 446 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ENSAO43768 121 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 NXPH3O95157 252 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 MPC2O95563 127 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 DEFA4P12838 97 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 BMPR1AP36894 532 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 FUT6P51993 359 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 DCDP81605 110 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 SLC25A35Q3KQZ1 300 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 DEFB119Q8N690 84 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 CLEC18CQ8NCF0 446 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 TMEM40Q8WWA1 233 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 FAM3CQ92520 227 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 OXGR1Q96P68 337 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 USB1Q9BQ65 265 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 TMEM191AQ9H0A3 160 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ISG20L2Q9H9L3 353 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 RREB1Q92766 1687 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 RBFOX3A6NFN3 312 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ANKRD61A6NGH8 418 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 FXYD1O00168 92 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 HSPB6O14558 160 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ARPC3O15145 178 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ZNF749O43361 778 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ARG2P78540 354 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 DPTQ07507 201 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 PRSS36Q5K4E3 855 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 METRNLQ641Q3 311 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 TRAT1Q6PIZ9 186 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 OSR2Q8N2R0 312 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ANKLE1Q8NAG6 615 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 OR51H1Q8NH63 302 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 CMBLQ96DG6 245 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 MACROD1Q9BQ69 325 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 FAM173AQ9BQD7 235 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 SLC2A10O95528 541 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 MDH2P40926 338 aaKnown RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 ELOBQ15370 118 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 SMUG1Q53HV7 270 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 BCORP1Q8N888 145 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 SLC16A11Q8NCK7 471 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 ERGIC1Q969X5 290 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 NEIL1Q96FI4 390 aaPredicted RBP6.27□□□□□ -1.41
SORT1-209ENST00000538502 PARP11Q9NR21 331 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 SLC45A2Q9UMX9 530 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 NTNG1Q9Y2I2 539 aa6.27□□□□□ -1.41
SORT1-209ENST00000538502 OR5H15A6NDH6 313 aa6.26□□□□□ -1.41
SORT1-209ENST00000538502 TLCD2A6NGC4 264 aa6.26□□□□□ -1.41
SORT1-209ENST00000538502 OR5H1A6NKK0 313 aa6.26□□□□□ -1.41
SORT1-209ENST00000538502 COX7A2P2O60397 106 aa6.26□□□□□ -1.41
SORT1-209ENST00000538502 SEMA7AO75326 666 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms