RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RNF224P0DH78 156 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 IGFBP6P24592 240 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GGTLC2Q14390 218 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 BTNL3Q6UXE8 466 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 NRSN1Q8IZ57 195 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 OR4C5Q8NGB2 326 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 IRF7Q92985 503 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 KTI12Q96EK9 354 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 WWTR1Q9GZV5 400 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 RAB22AQ9UL26 194 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 A0A087WUJ7 227 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PLPP1O14494 284 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 AQP7O14520 342 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SEC11BP0C7V7 166 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GLI4P10075 376 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 FCGR2AP12318 317 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 NPPBP16860 134 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ARL3P36405 182 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLC35A1P78382 337 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 IHHQ14623 411 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ACER2Q5QJU3 275 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 DPY19L2P2Q6ZN68 376 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ARRDC1Q8N5I2 433 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 NKAIN3Q8N8D7 197 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 OR51I2Q9H344 312 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLC39A9Q9NUM3 307 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 GOLT1BQ9Y3E0 138 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF816-ZNF321PA0A0X1KG74 233 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 XKRY2A2RUG3 117 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 IGLON5A6NGN9 336 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 TCF21O43680 179 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 FCMRO60667 390 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 CLEC3AO75596 197 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 CNMDO75829 334 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 BLVRBP30043 206 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PPP1R1AQ13522 171 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF321PQ8N8H1 164 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 CLEC1AQ8NC01 280 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLC16A11Q8NCK7 471 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 RPUSD4Q96CM3 377 aaKnown RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 C2orf50Q96LR7 162 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 NEU1Q99519 415 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PBX4Q9BYU1 374 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SMOC1Q9H4F8 434 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 ALPK3Q96L96 1907 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 HLA-HP01893 362 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SUMO1P63165 101 aaKnown RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 BAXQ07812 192 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 DHRS2Q13268 280 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLC25A42Q86VD7 318 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 FAM219AQ8IW50 185 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 UEVLDQ8IX04 471 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 DND1Q8IYX4 353 aaKnown RBP4.88□□□□□ -1.63
PTPRD-213ENST00000537002 SLC22A24Q8N4F4 322 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 DTWD2Q8NBA8 298 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 PGLYRP3Q96LB9 341 aa4.88□□□□□ -1.63
PTPRD-213ENST00000537002 MYO16Q9Y6X6 1858 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TRAV34A0A0B4J273 112 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 GPR137BO60478 399 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 GREM1O60565 184 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 NTN1O95631 604 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 FASLGP48023 281 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SULT1A1P50225 295 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TAS2R30P59541 319 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TMPPEQ6ZT21 453 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 GPR32P1Q8NGA4 272 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 KCNG3Q8TAE7 436 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 KCNK15Q9H427 330 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF160Q9HCG1 818 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SPHK2Q9NRA0 654 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 RYDENQ9NUL5 291 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 KLHL13Q9P2N7 655 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 B3GALT5Q9Y2C3 310 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PCDHGA1Q9Y5H4 931 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF727A8MUV8 499 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SULT2B1O00204 365 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ARPC3O15145 178 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 KLF4O43474 513 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SOD2P04179 222 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 RPLP1P05386 114 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 FCARP24071 287 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 MST1P26927 711 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 KRTDAPP60985 99 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 REEP5Q00765 189 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 MFSD12Q6NUT3 480 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 GPR137CQ8N3F9 429 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM234Q8WY98 164 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SLC35A4Q96G79 324 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF2Q9BSG1 426 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 MRPL37Q9BZE1 423 aaKnown RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 DNAJC25-GNG10A0A024R161 153 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 PDGFBP01127 241 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-213ENST00000537002 C1QCP02747 245 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 OPN1LWP04000 364 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 SFTPDP35247 375 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF765Q7L2R6 523 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 OR52E1Q8NGJ3 308 aa4.87□□□□□ -1.63
PTPRD-213ENST00000537002 ASB5Q8WWX0 329 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms