RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 IGHV4-34P06331 123 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 HOXC4P09017 264 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 FBXO45P0C2W1 286 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SFTA3P0C7M3 94 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TBC1D3HP0C7X1 549 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SFTPCP11686 197 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 S1PR1P21453 382 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 ADH6P28332 368 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 DRD3P35462 400 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SERPINF1P36955 418 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 AKR1C2P52895 323 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 F2RL1P55085 397 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SNRPNP63162 240 aaKnown RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 AKR1C1Q04828 323 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 HABP2Q14520 560 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 GFOD2Q3B7J2 385 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 IGSF11Q5DX21 431 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 MESTQ5EB52 335 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 PRRT3Q5FWE3 981 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TEX30Q5JUR7 227 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 GLYATL3Q5SZD4 288 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 AGBL4Q5VU57 503 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TBC1D3CQ6IPX1 549 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 RNF44Q7L0R7 432 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 DPY19L4Q7Z388 723 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 MDGA2Q7Z553 956 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 ATG4DQ86TL0 474 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 BIVMQ86UB2 503 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 NAA40Q86UY6 237 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 FJX1Q86VR8 437 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 CATSPERDQ86XM0 798 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TBC1D3Q8IZP1 549 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 C2CD4CQ8TF44 421 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 CASTOR1Q8WTX7 329 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TMED6Q8WW62 240 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 ANKRD9Q96BM1 317 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 C14orf79Q96F83 325 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SCARF2Q96GP6 870 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SLC25A44Q96H78 314 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TSPAN32Q96QS1 320 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 APOOQ9BUR5 198 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 SEBOXQ9HB31 216 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-216ENST00000536548 MMP25Q9NPA2 562 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 GSN-AS1Q9NRJ2 163 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 CYTL1Q9NRR1 136 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TAS2R4Q9NYW5 299 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 PILRAQ9UKJ1 303 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 GTF2A1LQ9UNN4 478 aa6.94□□□□□ -1.3
CPSF7-216ENST00000536548 TDRD6O60522 2096 aaKnown RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 A0A1B0GTH9 108 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 CDRT15L2A8MXV6 281 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 C2orf74A8MZ97 194 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 H0YGG7 62 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 LATO43561 262 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 OR2T1O43869 369 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 EIF1BO60739 113 aaKnown RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 SFT2D2O95562 160 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 BPNT1O95861 308 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 HLA-DQA2P01906 255 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ISG15P05161 165 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 CSN2P05814 226 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 GLAP06280 429 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ERCC1P07992 297 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 CHRM2P08172 466 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ASAH2BP0C7U1 165 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 FAM157CP0CG43 387 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 FOSL1P15407 271 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 HPGDP15428 266 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 MUC1P15941 1255 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF14P17017 642 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 AKR1C4P17516 323 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 RCC1P18754 421 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 AGAP20933 346 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 EIF1P41567 113 aaKnown RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 GLP1RP43220 463 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 SLC6A8P48029 635 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 SULT1A2P50226 295 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ARF3P61204 181 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 SNRPEP62304 92 aaKnown RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 RPL18Q07020 188 aaKnown RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 MEP1BQ16820 701 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 MST1LQ2TV78 715 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ZNF260Q3ZCT1 412 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 GXYLT1Q4G148 440 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 TMEM128Q5BJH2 165 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 DNM1P34Q6PK57 102 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 OPN5Q6U736 354 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 C5orf46Q6UWT4 87 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 CD163Q86VB7 1156 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ANGPTL5Q86XS5 388 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ZFP82Q8N141 532 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 PAQR4Q8N4S7 273 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-216ENST00000536548 ARRDC1Q8N5I2 433 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 JAGN1Q8N5M9 183 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 CSNK1A1LQ8N752 337 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 TMEM52Q8NDY8 209 aa6.93□□□□□ -1.3
CPSF7-216ENST00000536548 OR51A4Q8NGJ6 313 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms