RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 GABARAPL3Q9BY60 117 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 SHARPINQ9H0F6 387 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 TOR3AQ9H497 397 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 HIF1ANQ9NWT6 349 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 UBAP1Q9NZ09 502 aa11.08□□□□□ -0.64
PRKDC-206ENST00000536429 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.08□□□□□ -0.64
PRKDC-206ENST00000536429 hCG_38984A0A1B0GV85 526 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 EI24O14681 340 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 MAGEB4O15481 346 aaPredicted RBP11.07□□□□□ -0.64
PRKDC-206ENST00000536429 PLPP2O43688 288 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 SRP9P49458 86 aaKnown RBP11.07□□□□□ -0.64
PRKDC-206ENST00000536429 RAD23AP54725 363 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 DVL1P1P54792 670 aaPredicted RBP11.07□□□□□ -0.64
PRKDC-206ENST00000536429 BTG1P62324 171 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 FAM3AP98173 230 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 OR8G1Q15617 311 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 MPPED2Q15777 294 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 TIGD6Q17RP2 521 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 GFOD2Q3B7J2 385 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 MEPCEQ7L2J0 689 aaKnown RBP11.07□□□□□ -0.64
PRKDC-206ENST00000536429 UBE2FQ969M7 185 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM186Q96B77 213 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 PGAM5Q96HS1 289 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 RBM4BQ9BQ04 359 aaKnown RBP11.07□□□□□ -0.64
PRKDC-206ENST00000536429 ADAT1Q9BUB4 502 aaKnown RBP11.07□□□□□ -0.64
PRKDC-206ENST00000536429 YIPF3Q9GZM5 350 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 LAMP5Q9UJQ1 280 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
PRKDC-206ENST00000536429 XRCC2O43543 280 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 APOL3O95236 402 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 ALPLP05186 524 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 FAM157CP0CG43 387 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 ZFP36P26651 326 aaKnown RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 CD200P41217 278 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 PSMA6P60900 246 aaKnown RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 SEC61A1P61619 476 aaKnown RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 ZIK1Q3SY52 487 aaPredicted RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 LCN1P1Q5VSP4 162 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 NXNL2Q5VZ03 156 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 ZFP1Q6P2D0 407 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 RHOUQ7L0Q8 258 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 LRRC28Q86X40 367 aaPredicted RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 OR8B12Q8NGG6 310 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 OR51F2Q8NH61 342 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 LYZL4Q96KX0 146 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 CNN2Q99439 309 aaKnown RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 PRRG3Q9BZD7 231 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 OR10A2Q9H208 303 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 ADGRL4Q9HBW9 690 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 S100A14Q9HCY8 104 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 UFSP2Q9NUQ7 469 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 MRPL15Q9P015 296 aaKnown RBP11.06□□□□□ -0.64
PRKDC-206ENST00000536429 LPAR3Q9UBY5 353 aa11.06□□□□□ -0.64
PRKDC-206ENST00000536429 TANC2Q9HCD6 1990 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 E9PQ18 207 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 FAM20BO75063 409 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 ACKR3P25106 362 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 GATA4P43694 442 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 GSK3AP49840 483 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 LCN2P80188 198 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 KRT77Q7Z794 578 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 WDR86Q86TI4 376 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.05□□□□□ -0.64
PRKDC-206ENST00000536429 SLC35F2Q8IXU6 374 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 CBR4Q8N4T8 237 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 C19orf18Q8NEA5 215 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 PPP1R14AQ96A00 147 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 RAB39BQ96DA2 213 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 MDFIQ99750 246 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 G6PC2Q9NQR9 355 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 FAM206AQ9NX38 181 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 USE1Q9NZ43 259 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 ENOPH1Q9UHY7 261 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 RHBDD3Q9Y3P4 386 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 DYSFO75923 2080 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 COL6A5A8TX70 2615 aa11.05□□□□□ -0.64
PRKDC-206ENST00000536429 SLC22A31A6NKX4 558 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 CEACAM18A8MTB9 384 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 F5H0A9 414 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 PTBP3O95758 552 aaKnown RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 AVPP01185 164 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 APOC1P02654 83 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 SRD5A1P18405 259 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 ALDH3A2P51648 485 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 SRSF2Q01130 221 aaKnown RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 ROM1Q03395 351 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 MFGE8Q08431 387 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM155Q4W5P6 130 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 PLEKHG7Q6ZR37 379 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 C1orf229Q6ZS94 237 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 ZNF826PQ6ZT77 177 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 CELF2-AS1Q8N7Q2 184 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 OR51G2Q8NGK0 314 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 Q8TCH9 128 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 EME1Q96AY2 570 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 OR8B4Q96RC9 309 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms