RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CD80P33681 288 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 GRK5P34947 590 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 SLC15A1P46059 708 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 PITPNBP48739 271 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 CX3CR1P49238 355 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 BLVRAP53004 296 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 TEX30Q5JUR7 227 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 LINC01590Q5TEZ4 76 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 SFRP4Q6FHJ7 346 aaPredicted RBP11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 BTNL3Q6UXE8 466 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 CD300LDQ6UXZ3 194 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 DPY19L4Q7Z388 723 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 BCL6BQ8N143 479 aaPredicted RBP11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 OR56B2PQ8NGI1 322 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 Q8TCH9 128 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 ERGIC1Q969X5 290 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 OR51V1Q9H2C8 321 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 MMADHCQ9H3L0 296 aaPredicted RBP11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 FN3KRPQ9HA64 309 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 DNAJC27Q9NZQ0 273 aa11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 MRPL15Q9P015 296 aaKnown RBP11.94□□□□□ -0.5
RTN3P1-201ENST00000536295 IGHV2-70DA0A0C4DH43 119 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 AQP12BA6NM10 295 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 XRCC2O43543 280 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 E2F6O75461 281 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 GRPP07492 148 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 PAICSP22234 425 aaKnown RBP11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 CFPP27918 469 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 GRB2P62993 217 aaKnown RBP11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 PAX2Q02962 417 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 PAX8Q06710 450 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 GK3PQ14409 553 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 GINS1Q14691 196 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 OR8B8Q15620 311 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 TIGD6Q17RP2 521 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 GFOD2Q3B7J2 385 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 LRRN1Q6UXK5 716 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 DCDC5Q6ZRR9 648 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 SPATA24Q86W54 205 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 AQP12AQ8IXF9 295 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 HS3ST5Q8IZT8 346 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 RAB40AQ8WXH6 277 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 ZMYND19Q96E35 227 aaPredicted RBP11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 ABHD6Q9BV23 337 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 NTN4Q9HB63 628 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 BRD7Q9NPI1 651 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 C1orf123Q9NWV4 160 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 RNF7Q9UBF6 113 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
RTN3P1-201ENST00000536295 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 TMEM89A2RUT3 159 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 ARRDC5A6NEK1 342 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 A6NLC8 198 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 DYNC1I1O14576 645 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 GYG2O15488 501 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 GLCEO94923 617 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 FSTL3O95633 263 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 IGHV4-38-2P0DP08 117 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 PRKACGP22612 351 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 CPT2P23786 658 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 UBA52P62987 128 aaKnown RBP11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 FLOT2Q14254 428 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 PLBD1Q6P4A8 553 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 ZNF826PQ6ZT77 177 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 FAM57BQ71RH2 274 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 TRPM8Q7Z2W7 1104 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 PARP8Q8N3A8 854 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 RNF133Q8WVZ7 376 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 REEP6Q96HR9 211 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 TECTBQ96PL2 329 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 AMELYQ99218 206 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 NUDT16L1Q9BRJ7 211 aaKnown RBP11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 MS4A7Q9GZW8 240 aaPredicted RBP11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 OPA3Q9H6K4 179 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 ZNF556Q9HAH1 456 aa11.92□□□□□ -0.5
RTN3P1-201ENST00000536295 TRAV40A0A0B4J280 105 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 hCG_1807616A0A1W2PRN6 198 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 ANKRD30BLA7E2S9 258 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 LGALS8O00214 317 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 SELENOFO60613 162 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 H2BFMP0C1H6 154 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 FAM3AP98173 230 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 DNAL1Q4LDG9 190 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 KLHL12Q53G59 568 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 WDR25Q64LD2 544 aaPredicted RBP11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 SHFQ7M4L6 423 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 TIGD4Q8IY51 512 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 C3orf56Q8N813 242 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 OR8S1Q8NH09 359 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
RTN3P1-201ENST00000536295 SPSB4Q96A44 273 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms