RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLC33A1O00400 549 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 PIRO00625 290 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SAP30O75446 220 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 RDH16O75452 317 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 GLSO94925 669 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 PRH1P02810 166 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 KLK1P06870 262 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ZGLP1P0C6A0 271 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ZNF286BP0CG31 522 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 AKAIN1P0CW23 69 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 MAOAP21397 527 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 FPR2P25090 351 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 HTR2CP28335 458 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 HTR1FP30939 366 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 NANOS3P60323 173 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 ERVS71-1P61550 626 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 GXYLT1Q4G148 440 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 AGBL4Q5VU57 503 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 TMEM268Q5VZI3 342 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 C6orf15Q6UXA7 325 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 ERN2Q76MJ5 926 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 SLC16A14Q7RTX9 510 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 NUFIP2Q7Z417 695 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 VRK2Q86Y07 508 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 GBGT1Q8N5D6 347 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 OR13C3Q8NGS6 347 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 IFI44Q8TCB0 444 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 KISS1RQ969F8 398 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 MRGPRFQ96AM1 343 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 CMBLQ96DG6 245 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PELI1Q96FA3 418 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 OR10C1Q96KK4 312 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 TRIB3Q96RU7 358 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PAAF1Q9BRP4 392 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SF3B5Q9BWJ5 86 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 TEX101Q9BY14 249 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SYT4Q9H2B2 425 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 NCOR1P1Q9H4R4 102 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SLC32A1Q9H598 525 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SGK2Q9HBY8 427 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 OSER1Q9NX31 292 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ASIC5Q9NY37 505 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ST6GALNAC2Q9UJ37 374 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 GTF2A1LQ9UNN4 478 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ZFP30Q9Y2G7 519 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 DENND4CQ5VZ89 1909 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 TRAV27A0A087WT01 109 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 LOC100289279A0A1B0GTE1 492 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 A0A1W2PS29 197 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ZNF860A6NHJ4 632 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 GLOD5A6NK44 160 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 VSTM2BA6NLU5 285 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PRR32B1ATL7 298 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 H7C417 338 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 DVL1O14640 695 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 NPC1O15118 1278 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SMAD6O43541 496 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 HBP1O60381 514 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ERAL1O75616 437 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 DFFBO76075 338 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 EFEMP2O95967 443 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 CD160O95971 181 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 THY1P04216 161 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ITGB2P05107 769 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 CKMP06732 381 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 IL3P08700 152 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 HOXB6P17509 224 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 S1PR1P21453 382 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 RPL34P49207 117 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 HINT1P49773 126 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 SELENOTP62341 195 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ACSM1Q08AH1 577 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ARHGAP19Q14CB8 494 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PGGHGQ32M88 737 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 SOHLH1Q5JUK2 328 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PLPP4Q5VZY2 271 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 DMKNQ6E0U4 476 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 OR8G2PQ6IF36 304 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 GLB1LQ6UWU2 654 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ADCK2Q7Z695 626 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PEG10Q86TG7 708 aaKnown RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 TMEM256Q8N2U0 113 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 LILRA3Q8N6C8 439 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 LINC01465Q8N7H1 131 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ZNF740Q8NDX6 193 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 OR1P1Q8NH06 330 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 OR51A7Q8NH64 312 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PFN4Q8NHR9 129 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ABHD3Q8WU67 409 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 DYRK2Q92630 601 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ERGIC1Q969X5 290 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PPP1R14AQ96A00 147 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 MOAP1Q96BY2 351 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 Q96M85 177 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ADOQ96SZ5 270 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 ZNF426Q9BUY5 554 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 MTFP1Q9UDX5 166 aa3.32□□□□□ -1.88
MCF2-210ENST00000536274 PRG3Q9Y2Y8 225 aaPredicted RBP3.32□□□□□ -1.88
MCF2-210ENST00000536274 KIAA1549Q9HCM3 1950 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms