RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 KPRPQ5T749 579 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 METTL11BQ5VVY1 283 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM90A1Q86YD7 464 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 C11orf53Q8IXP5 236 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 BHLHE23Q8NDY6 225 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 OR4C15Q8NGM1 316 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 SPRYD4Q8WW59 207 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 SLCO4A1Q96BD0 722 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 ERMAPQ96PL5 475 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 PITX2Q99697 317 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 NMNAT2Q9BZQ4 307 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 DPAGT1Q9H3H5 408 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 CNTD2Q9H8S5 307 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 SMURF1Q9HCE7 757 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 RPUSD1Q9UJJ7 312 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 AURKCQ9UQB9 309 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 POLR1DQ9Y2S0 133 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 RNF114Q9Y508 228 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 IGHV3OR16-10A0A075B7F0 116 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 SLC22A31A6NKX4 558 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 F5H5K5 113 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 BHLHE40O14503 412 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 GSTA4O15217 222 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 XRCC2O43543 280 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM107AO95990 144 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 LCATP04180 440 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 HSD17B1P14061 328 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 CA6P23280 308 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 OMGP23515 440 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 PRDX6P30041 224 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 IFNGR2P38484 337 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 TGM4P49221 684 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 PRSS12P56730 875 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 GNGT1P63211 74 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 OR8G1Q15617 311 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 AANATQ16613 207 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 C11orf88Q6PI97 169 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 PRSS45Q7RTY3 260 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 NAA40Q86UY6 237 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 GALNT4Q8N4A0 578 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 LINC00471Q8N535 108 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 CYB561A3Q8NBI2 242 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 OR2AJ1Q8NGZ0 328 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 TNFRSF14Q92956 283 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 KCTD14Q9BQ13 255 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 MYLK2Q9H1R3 596 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 WDR76Q9H967 626 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 MARCH7Q9H992 704 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 SRA1Q9HD15 236 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 SPAG4Q9NPE6 437 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 IL1RAPQ9NPH3 570 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 C14orf119Q9NWQ9 140 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 FBLN5Q9UBX5 448 aa9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 PRPF19Q9UMS4 504 aaKnown RBP9.24□□□□□ -0.93
CLSTN3-206ENST00000535668 ADAM20O43506 726 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 KRT36O76013 467 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 TGFBR2P37173 567 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 BLVRAP53004 296 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 SRSF4Q08170 494 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 SNCBQ16143 134 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 SNAI3Q3KNW1 292 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 FGD3Q5JSP0 725 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 PRAMEF6Q5VXH4 476 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 OTPQ5XKR4 325 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 GLYATQ6IB77 296 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 ZNF770Q6IQ21 691 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 BRICD5Q6PL45 260 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 Q6ZSV7 163 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 BTN2A1Q7KYR7 527 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 MRPL21Q7Z2W9 205 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 JAZF1Q86VZ6 243 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 LNX2Q8N448 690 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM86B1Q8N7N1 296 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 OR2T4Q8NH00 348 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 OR4K13Q8NH42 304 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 OR5R1Q8NH85 324 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 FANK1Q8TC84 345 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 BCAS4Q8TDM0 211 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 TAF15Q92804 592 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 CMTM5Q96DZ9 223 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 PYURFQ96I23 114 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 KCNJ15Q99712 375 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 PCGF1Q9BSM1 259 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 ADAT1Q9BUB4 502 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 NSRP1Q9H0G5 558 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 TOR3AQ9H497 397 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 RGCCQ9H4X1 137 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 RPRD1BQ9NQG5 326 aaKnown RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 ZNRD1Q9P1U0 126 aa9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 CAB39Q9Y376 341 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-206ENST00000535668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 RNASEK-C17orf49H0YIS7 233 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 DVL1O14640 695 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 GADD45GO95257 159 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 IGHV4-59P01825 116 aa9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 CFL1P23528 166 aaKnown RBP9.22□□□□□ -0.93
CLSTN3-206ENST00000535668 GRK5P34947 590 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms