RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 OR2H1Q9GZK4 316 aa11.74□□□□□ -0.53
BEST1-208ENST00000534553 MOV10Q9HCE1 1003 aaKnown RBP11.74□□□□□ -0.53
BEST1-208ENST00000534553 HRASLSQ9HDD0 168 aa11.74□□□□□ -0.53
BEST1-208ENST00000534553 GLRX2Q9NS18 164 aa11.74□□□□□ -0.53
BEST1-208ENST00000534553 ZNF319Q9P2F9 582 aa11.74□□□□□ -0.53
BEST1-208ENST00000534553 N6AMT1Q9Y5N5 214 aa11.74□□□□□ -0.53
BEST1-208ENST00000534553 TRAV18A0A075B6X5 111 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 PRAF2O60831 178 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 CEACAM4O75871 244 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 LPLP06858 475 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 COX5BP10606 129 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 PRF1P14222 555 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 ABOP16442 354 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 GIFP27352 417 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 HTR5AP47898 357 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 CARTPTQ16568 116 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 RSPO1Q2MKA7 263 aaPredicted RBP11.73□□□□□ -0.53
BEST1-208ENST00000534553 RNASE12Q5GAN4 147 aaKnown RBP11.73□□□□□ -0.53
BEST1-208ENST00000534553 TUSC5Q8IXB3 177 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 FAM46BQ96A09 425 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 UPB1Q9UBR1 384 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 ALG5Q9Y673 324 aa11.73□□□□□ -0.53
BEST1-208ENST00000534553 A0A0B4J293 547 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 C7orf66A4D0T2 115 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 CHRM2P08172 466 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 HCKP08631 526 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 ALDH3B1P43353 468 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 PSG4Q00888 419 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 PMPCAQ10713 525 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 CLN3Q13286 438 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 CAMK2BQ13554 666 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 AWAT2Q6E213 333 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 OR5AS1Q8N127 324 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 KCNG3Q8TAE7 436 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 AKAP1Q92667 903 aaKnown RBP eCLIP11.72□□□□□ -0.53
BEST1-208ENST00000534553 SPSB1Q96BD6 273 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 SLC7A10Q9NS82 523 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 CNTRLQ7Z7A1 2325 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 XRCC2O43543 280 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 MMP7P09237 267 aaPredicted RBP11.72□□□□□ -0.53
BEST1-208ENST00000534553 PSMB1P20618 241 aaKnown RBP11.72□□□□□ -0.53
BEST1-208ENST00000534553 CD300CQ08708 224 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 PLA2G7Q13093 441 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 TBRG1Q3YBR2 411 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 ZNF774Q6NX45 483 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.72□□□□□ -0.53
BEST1-208ENST00000534553 FGD2Q7Z6J4 655 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 SKA3Q8IX90 412 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 SEMA6DQ8NFY4 1073 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 GPX8Q8TED1 209 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 SSC4DQ8WTU2 575 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 LYZL4Q96KX0 146 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 TECTBQ96PL2 329 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 TRAF4Q9BUZ4 470 aaPredicted RBP11.72□□□□□ -0.53
BEST1-208ENST00000534553 PRDM14Q9GZV8 571 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 CALHM2Q9HA72 323 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 ING3Q9NXR8 418 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 DLL3Q9NYJ7 618 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 FREM2Q5SZK8 3169 aa11.72□□□□□ -0.53
BEST1-208ENST00000534553 SLC22A20A6NK97 555 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 TMEM14DPA8MWL7 114 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 KDM4BO94953 1096 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 MT-ND4P03905 459 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 H2AFB2P0C5Z0 115 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 RRAS2P62070 204 aaPredicted RBP11.71□□□□□ -0.54
BEST1-208ENST00000534553 QRFPP83859 136 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 RIPPLY1Q0D2K3 151 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 PCGF3Q3KNV8 242 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 GLCCI1Q86VQ1 547 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 ANGPTL5Q86XS5 388 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 ZNF100Q8IYN0 542 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 GCDHQ92947 438 aaPredicted RBP11.71□□□□□ -0.54
BEST1-208ENST00000534553 GPER1Q99527 375 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 CST11Q9H112 138 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 WNT5BQ9H1J7 359 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 DEFB127Q9H1M4 99 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 MRPS28Q9Y2Q9 187 aaKnown RBP11.71□□□□□ -0.54
BEST1-208ENST00000534553 LIPGQ9Y5X9 500 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 PTPRBP23467 1997 aa11.71□□□□□ -0.54
BEST1-208ENST00000534553 PHF3Q92576 2039 aaKnown RBP11.71□□□□□ -0.54
BEST1-208ENST00000534553 MED13Q9UHV7 2174 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 PEX14O75381 377 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 LCATP04180 440 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 DBHP09172 617 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 AKAIN1P0CW23 69 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 VSIG8P0DPA2 414 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 RCVRNP35243 200 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 ARR3P36575 388 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 TAS2R19P59542 299 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 ARF1P84077 181 aaKnown RBP11.7□□□□□ -0.54
BEST1-208ENST00000534553 CNN3Q15417 329 aaKnown RBP11.7□□□□□ -0.54
BEST1-208ENST00000534553 ZBTB37Q5TC79 503 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 ZNF101Q8IZC7 436 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 TCTE3Q8IZS6 198 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 SGK3Q96BR1 496 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 REEP6Q96HR9 211 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms