RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ZNF826PQ6ZT77 177 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 C18orf65Q6ZTR6 163 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 HIST3H2AQ7L7L0 130 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 SLC36A1Q7Z2H8 476 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 OR2W3Q7Z3T1 314 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 TSPYL5Q86VY4 417 aaPredicted RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 DYNAPQ8N1N2 210 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 OR52H1Q8NGJ2 320 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 BBS10Q8TAM1 723 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 MZB1Q8WU39 189 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 ACOT11Q8WXI4 607 aaPredicted RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 HIST1H2ACQ93077 130 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 DUS3LQ96G46 650 aaKnown RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 DUX3Q96PT4 197 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 PAIP2Q9BPZ3 127 aaKnown RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 ADAT1Q9BUB4 502 aaKnown RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 HCAR1Q9BXC0 346 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 EMC7Q9NPA0 242 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 KCNK9Q9NPC2 374 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 POLE4Q9NR33 117 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 AURKCQ9UQB9 309 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 HSPG2P98160 4391 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 OR6C6A6NF89 314 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 SEC14L6B5MCN3 397 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 ACOT8O14734 319 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 CHP2O43745 196 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 TPST2O60704 377 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 SCG5P05408 212 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 CA6P23280 308 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 VAMP1P23763 118 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 COX7A1P24310 79 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 CEBPDP49716 269 aaPredicted RBP5.12□□□□□ -1.59
CD44-237ENST00000534082 CLNS1AP54105 237 aaKnown RBP5.12□□□□□ -1.59
CD44-237ENST00000534082 LGALS4P56470 323 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 MICBQ29980 383 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 LRRC10Q5BKY1 277 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 DHRS4L2Q6PKH6 230 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 PIGWQ7Z7B1 504 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 LHFPL4Q7Z7J7 247 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 KLHL30-AS1Q8NEE0 82 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 RNF141Q8WVD5 230 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 MAL2Q969L2 176 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 APOBEC3DQ96AK3 386 aaPredicted RBP5.12□□□□□ -1.59
CD44-237ENST00000534082 FOXRED1Q96CU9 486 aaPredicted RBP5.12□□□□□ -1.59
CD44-237ENST00000534082 WACQ9BTA9 647 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 ALG12Q9BV10 488 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 BCL2L10Q9HD36 194 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 INIPQ9NRY2 104 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 SCOCQ9UIL1 159 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 NDUFAF1Q9Y375 327 aa5.12□□□□□ -1.59
CD44-237ENST00000534082 NOP16Q9Y3C1 178 aaKnown RBP5.12□□□□□ -1.59
CD44-237ENST00000534082 A0A1W2PPM1 405 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 FAM90A8PA6NJQ4 464 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 NPIPB13A6NJU9 1138 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 NPIPB4C9JG80 1138 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 RFXANKO14593 260 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 LDLRAD4O15165 306 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 TPST1O60507 370 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 TRIM13O60858 407 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 GLCEO94923 617 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 HTR3BO95264 441 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 LY6G6CO95867 125 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 LPLP06858 475 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 GRPP07492 148 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 HCKP08631 526 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 MUC1P15941 1255 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 AMY2BP19961 511 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 SLC6A1P30531 599 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 AQP2P41181 271 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 TGM4P49221 684 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 TOP3AQ13472 1001 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 AQP6Q13520 282 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 GK2Q14410 553 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 STUMQ69YW2 141 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 ZNF613Q6PF04 617 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 MKXQ8IYA7 352 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 OR5M8Q8NGP6 311 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 OR1F12Q8NHA8 337 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 MOSPD2Q8NHP6 518 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 FNDC8Q8TC99 324 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 TCP10LQ8TDR4 215 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 LRRC29Q8WV35 223 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 SPRYD4Q8WW59 207 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 RHOVQ96L33 236 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 PPP1R36Q96LQ0 422 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 RBP7Q96R05 134 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 OR52E6Q96RD3 313 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 MYCBPQ99417 103 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 WFDC6Q9BQY6 131 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 SLC22A4Q9H015 551 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 HEXA-AS1Q9H8Q6 139 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 THUMPD1Q9NXG2 353 aaKnown RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 PSMC3IPQ9P2W1 217 aaPredicted RBP5.11□□□□□ -1.59
CD44-237ENST00000534082 ATPIF1Q9UII2 106 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 SLC13A4Q9UKG4 626 aa5.11□□□□□ -1.59
CD44-237ENST00000534082 SHISA3A0PJX4 238 aa5.1□□□□□ -1.59
CD44-237ENST00000534082 PSMB11A5LHX3 300 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms