RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 NMNAT3Q96T66 252 aa9.52□□□□□ -0.89
CLCF1-202ENST00000533438 PATZ1Q9HBE1 687 aaKnown RBP9.52□□□□□ -0.89
CLCF1-202ENST00000533438 UBAP1Q9NZ09 502 aa9.52□□□□□ -0.89
CLCF1-202ENST00000533438 PTTG3PQ9NZH4 202 aa9.52□□□□□ -0.89
CLCF1-202ENST00000533438 PPP1R3CQ9UQK1 317 aa9.52□□□□□ -0.89
CLCF1-202ENST00000533438 POLR1DQ9Y2S0 133 aa9.52□□□□□ -0.89
CLCF1-202ENST00000533438 A0A1B0GWJ7 208 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 IQCF6A8MYZ5 107 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 F5H0A9 414 aaPredicted RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 TMEM178BH3BS89 294 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 WBP4O75554 376 aaKnown RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 FOXH1O75593 365 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 RGS9O75916 674 aaPredicted RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SBK2P0C263 348 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 PAICSP22234 425 aaKnown RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 CFPP27918 469 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SLC25A1P53007 311 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SEC61A1P61619 476 aaKnown RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 BTG1P62324 171 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 CRMP1Q14194 572 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 TUSC1Q2TAM9 212 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 AADACL4Q5VUY2 407 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 MEDAGQ5VYS4 303 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 OR2T2Q6IF00 324 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SLC18B1Q6NT16 456 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 CORO6Q6QEF8 472 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SPICQ8N5J4 248 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SDR9C7Q8NEX9 313 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 OR5L1Q8NGL2 311 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 NANPQ8TBE9 248 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 APH1BQ8WW43 257 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 IL4I1Q96RQ9 567 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 C1QTNF5Q9BXJ0 243 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 NMNAT2Q9BZQ4 307 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 C7orf69Q9H7B7 122 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 SRA1Q9HD15 236 aaKnown RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 GCM1Q9NP62 436 aa9.51□□□□□ -0.89
CLCF1-202ENST00000533438 RPRD1BQ9NQG5 326 aaKnown RBP9.51□□□□□ -0.89
CLCF1-202ENST00000533438 OR6C68A6NDL8 312 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 A8MXK9 166 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 PRR23D1E9PI22 279 aaPredicted RBP9.5□□□□□ -0.89
CLCF1-202ENST00000533438 MLNRO43193 412 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 RENP00797 406 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 PRR23D2P0DMB1 279 aaPredicted RBP9.5□□□□□ -0.89
CLCF1-202ENST00000533438 SLC6A9P48067 706 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CENPAP49450 140 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 MMP16P51512 607 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CXCR4P61073 352 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 ZMYND11Q15326 602 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 C6orf141Q5SZD1 244 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 NXNL2Q5VZ03 156 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 LAIR2Q6ISS4 152 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CFAP77Q6ZQR2 320 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CPOQ8IVL8 374 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 KLHL36Q8N4N3 616 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CYB561A3Q8NBI2 242 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 DEFB108BQ8NET1 73 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 OR10AD1Q8NGE0 317 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CNIH3Q8TBE1 160 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 FAM216AQ8WUB2 273 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 DVL3Q92997 716 aaPredicted RBP9.5□□□□□ -0.89
CLCF1-202ENST00000533438 MEGF10Q96KG7 1140 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 Q96MT0 163 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 SLC30A2Q9BRI3 323 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 SUCNR1Q9BXA5 334 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 PNRC2Q9NPJ4 139 aaKnown RBP9.5□□□□□ -0.89
CLCF1-202ENST00000533438 MMP26Q9NRE1 261 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CLN6Q9NWW5 311 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 CYB5R1Q9UHQ9 305 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 PCDHGB5Q9Y5G0 923 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 DOCK11Q5JSL3 2073 aa9.5□□□□□ -0.89
CLCF1-202ENST00000533438 TMEM89A2RUT3 159 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 FAM183AA6NL82 134 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 H0YL77 283 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 TRAPPC2LH3BP13 241 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 TRIM77I1YAP6 450 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 IFNL4K9M1U5 179 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 PRODHO43272 600 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 SPRY1O43609 319 aaPredicted RBP9.49□□□□□ -0.89
CLCF1-202ENST00000533438 ZNF12P17014 697 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 SLC2A5P22732 501 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 MDH2P40926 338 aaKnown RBP9.49□□□□□ -0.89
CLCF1-202ENST00000533438 CSNK2BP67870 215 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 ZNF181Q2M3W8 571 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 PLBD1Q6P4A8 553 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 C12orf54Q6X4T0 127 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 LINC00346Q8IVM7 164 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 GID4Q8IVV7 300 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 MUC20Q8N307 709 aaPredicted RBP9.49□□□□□ -0.89
CLCF1-202ENST00000533438 OR13G1Q8NGZ3 307 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 ZNF420Q8TAQ5 688 aaPredicted RBP9.49□□□□□ -0.89
CLCF1-202ENST00000533438 ZNF582Q96NG8 517 aaPredicted RBP9.49□□□□□ -0.89
CLCF1-202ENST00000533438 JMJD8Q96S16 334 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 SLC6A7Q99884 636 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 ATF6BQ99941 703 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 HCAR1Q9BXC0 346 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 ESM1Q9NQ30 184 aa9.49□□□□□ -0.89
CLCF1-202ENST00000533438 PLCXD1Q9NUJ7 323 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms