RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 LILRB1Q8NHL6 650 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-207ENST00000533242 OR11A1Q9GZK7 315 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 KCNK15Q9H427 330 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 EXOSC3Q9NQT5 275 aaKnown RBP7.19□□□□□ -1.26
NEDD8-207ENST00000533242 SDHAF3Q9NRP4 125 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ABRACLQ9P1F3 81 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 OR5V1Q9UGF6 321 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 KCNG2Q9UJ96 466 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 YLPM1P49750 1951 aaKnown RBP7.19□□□□□ -1.26
NEDD8-207ENST00000533242 AIPO00170 330 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SS18L1O75177 396 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF780AO75290 641 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 TXNDC12O95881 172 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 HPXP02790 462 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 CD1AP06126 327 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ALOX5APP20292 161 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ERP29P30040 261 aaKnown RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 GDNFP39905 211 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 BTG1P62324 171 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SFRP4Q6FHJ7 346 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ASPHD2Q6ICH7 369 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 BEND4Q6ZU67 534 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SLC35D2Q76EJ3 337 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 NANOGNBQ7Z5D8 188 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF440Q8IYI8 595 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 KDM8Q8N371 416 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SMIM4Q8WVI0 70 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 FBXW5Q969U6 566 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SLC25A36Q96CQ1 311 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 GMPPAQ96IJ6 420 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ADAD1Q96M93 576 aaKnown RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 CACNG6Q9BXT2 260 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ACTR6Q9GZN1 396 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 BARX1Q9HBU1 254 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 TMEM160Q9NX00 188 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 GRHPRQ9UBQ7 328 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 RCE1Q9Y256 329 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 RNF115Q9Y4L5 304 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 USF3Q68DE3 2245 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 MXRA5Q9NR99 2828 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 STAB1Q9NY15 2570 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 OR2M5A3KFT3 312 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 OR4C45A6NMZ5 311 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 HAX1O00165 279 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF593O00488 134 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 GPRIN2O60269 458 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 AQP8O94778 261 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 NUDT14O95848 222 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SOD3P08294 240 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 DANCRP0C864 163 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 APEHP13798 732 aaKnown RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 S100A1P23297 94 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 KIR3DL2P43630 455 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 SGCBQ16585 318 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 NDUFA5Q16718 116 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 MEP1BQ16820 701 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 CCDC92Q53HC0 331 aaPredicted RBP7.18□□□□□ -1.26
NEDD8-207ENST00000533242 UBE2NLQ5JXB2 153 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 LINGO2Q7L985 606 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 LRRTM1Q86UE6 522 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 GLB1L2Q8IW92 636 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 C9orf62Q8N4C0 152 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 STEAP2Q8NFT2 490 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 DEDD2Q8WXF8 326 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 LAT2Q9GZY6 243 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 PTGES2Q9H7Z7 377 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 NIPAL2Q9H841 368 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 GLRX2Q9NS18 164 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 IKZF2Q9UKS7 526 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 HSPB11Q9Y547 144 aa7.18□□□□□ -1.26
NEDD8-207ENST00000533242 ABCA1O95477 2261 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 H3BML4 177 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 NDUFB5O43674 189 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 FADS1O60427 444 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 DOK2O60496 412 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 PNPP00491 289 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 IGF2P01344 180 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 CD3EP07766 207 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 HLA-DOBP13765 273 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 PRKCAP17252 672 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 PSMB1P20618 241 aaKnown RBP7.17□□□□□ -1.26
NEDD8-207ENST00000533242 CDKN1AP38936 164 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 CAPZA2P47755 286 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 SLC6A8P48029 635 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 ZP1P60852 638 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 HSF2Q03933 536 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 MAB21L1Q13394 359 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 GSG1Q2KHT4 349 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 KRTAP24-1Q3LI83 254 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 NCMAPQ5T1S8 102 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 LRRN1Q6UXK5 716 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 OR2G2Q8NGZ5 317 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 OR5AK2Q8NH90 309 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 GRPEL2Q8TAA5 225 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 THEM6Q8WUY1 208 aa7.17□□□□□ -1.26
NEDD8-207ENST00000533242 GIMAP1Q8WWP7 306 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms